RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 B3GALT5-AS1P59052 145 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 GANABQ14697 944 aaKnown RBP16.91■□□□□ 0.3
USP39-209ENST00000458268 HSPB2Q16082 182 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 GSTA3Q16772 222 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 GPAT3Q53EU6 434 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 EPGNQ6UW88 154 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 P4HA3Q7Z4N8 544 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 RNF130Q86XS8 419 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 GRAMD2AQ8IUY3 354 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 MCEMP1Q8IX19 187 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 MIER2Q8N344 545 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 MEIOBQ8N635 442 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 TRIML2Q8N7C3 387 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 NAXEQ8NCW5 288 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 CCDC115Q96NT0 180 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 PIGQQ9BRB3 760 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 BTNL2Q9UIR0 455 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 MKLN1Q9UL63 735 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 CARD8Q9Y2G2 431 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 ZNF337Q9Y3M9 751 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 H0YC42 278 aa16.9■□□□□ 0.3
USP39-209ENST00000458268 RFXANKO14593 260 aa16.9■□□□□ 0.3
USP39-209ENST00000458268 OIP5O43482 229 aa16.9■□□□□ 0.3
USP39-209ENST00000458268 TNFRSF21O75509 655 aa16.9■□□□□ 0.3
USP39-209ENST00000458268 TOXO94900 526 aa16.9■□□□□ 0.3
USP39-209ENST00000458268 PEPDP12955 493 aa16.9■□□□□ 0.3
USP39-209ENST00000458268 CHMP24386 653 aa16.9■□□□□ 0.3
USP39-209ENST00000458268 IDH3AP50213 366 aa16.9■□□□□ 0.3
USP39-209ENST00000458268 TPD52P55327 224 aaPredicted RBP16.9■□□□□ 0.3
USP39-209ENST00000458268 HPCAP84074 193 aa16.9■□□□□ 0.3
USP39-209ENST00000458268 ZNF117Q03924 483 aa16.9■□□□□ 0.3
USP39-209ENST00000458268 C6orf10Q5SRN2 563 aa16.9■□□□□ 0.3
USP39-209ENST00000458268 PDZK1Q5T2W1 519 aa16.9■□□□□ 0.3
USP39-209ENST00000458268 NSUN5P2Q63ZY6 315 aa16.9■□□□□ 0.3
USP39-209ENST00000458268 SAXO2Q658L1 398 aa16.9■□□□□ 0.3
USP39-209ENST00000458268 GCNT2Q8N0V5 402 aa16.9■□□□□ 0.3
USP39-209ENST00000458268 C9orf106Q8NAJ2 232 aa16.9■□□□□ 0.3
USP39-209ENST00000458268 GLB1L3Q8NCI6 653 aaPredicted RBP16.9■□□□□ 0.3
USP39-209ENST00000458268 B4GALNT2Q8NHY0 566 aa16.9■□□□□ 0.3
USP39-209ENST00000458268 CKAP2Q8WWK9 683 aa16.9■□□□□ 0.3
USP39-209ENST00000458268 VPS33AQ96AX1 596 aa16.9■□□□□ 0.3
USP39-209ENST00000458268 SDF2Q99470 211 aa16.9■□□□□ 0.3
USP39-209ENST00000458268 KLHDC3Q9BQ90 382 aa16.9■□□□□ 0.3
USP39-209ENST00000458268 RUBCNLQ9H714 662 aa16.9■□□□□ 0.3
USP39-209ENST00000458268 TMEM185BQ9H7F4 350 aa16.9■□□□□ 0.3
USP39-209ENST00000458268 PKDREJQ9NTG1 2253 aa16.89■□□□□ 0.29
USP39-209ENST00000458268 EEF1E1-BLOC1S5C9J1V9 151 aa16.89■□□□□ 0.29
USP39-209ENST00000458268 DVL2O14641 736 aa16.89■□□□□ 0.29
USP39-209ENST00000458268 EEF1E1O43324 174 aaKnown RBP16.89■□□□□ 0.29
USP39-209ENST00000458268 STX11O75558 287 aa16.89■□□□□ 0.29
USP39-209ENST00000458268 NGFRP08138 427 aa16.89■□□□□ 0.29
USP39-209ENST00000458268 CPN1P15169 458 aa16.89■□□□□ 0.29
USP39-209ENST00000458268 ZNF708P17019 499 aa16.89■□□□□ 0.29
USP39-209ENST00000458268 LCN1P31025 176 aa16.89■□□□□ 0.29
USP39-209ENST00000458268 POLR2JP52435 117 aaKnown RBP16.89■□□□□ 0.29
USP39-209ENST00000458268 ATP12AP54707 1039 aa16.89■□□□□ 0.29
USP39-209ENST00000458268 CLDN18P56856 261 aa16.89■□□□□ 0.29
USP39-209ENST00000458268 SNTB1Q13884 538 aaKnown RBP16.89■□□□□ 0.29
USP39-209ENST00000458268 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.89■□□□□ 0.29
USP39-209ENST00000458268 MISPQ8IVT2 679 aa16.89■□□□□ 0.29
USP39-209ENST00000458268 ARSGQ96EG1 525 aa16.89■□□□□ 0.29
USP39-209ENST00000458268 NEURL3Q96EH8 262 aa16.89■□□□□ 0.29
USP39-209ENST00000458268 MAGEB18Q96M61 343 aa16.89■□□□□ 0.29
USP39-209ENST00000458268 HOXD1Q9GZZ0 328 aa16.89■□□□□ 0.29
USP39-209ENST00000458268 ZIM2Q9NZV7 527 aa16.89■□□□□ 0.29
USP39-209ENST00000458268 MRPS18CQ9Y3D5 142 aaKnown RBP16.89■□□□□ 0.29
USP39-209ENST00000458268 NBPF19A0A087WUL8 3843 aa16.89■□□□□ 0.29
USP39-209ENST00000458268 A0A1W2PQD3 144 aa16.88■□□□□ 0.29
USP39-209ENST00000458268 CD8B2A6NJW9 211 aa16.88■□□□□ 0.29
USP39-209ENST00000458268 EIF1AYO14602 144 aaKnown RBP16.88■□□□□ 0.29
USP39-209ENST00000458268 FCMRO60667 390 aa16.88■□□□□ 0.29
USP39-209ENST00000458268 IL6P05231 212 aa16.88■□□□□ 0.29
USP39-209ENST00000458268 TMIGD3P0DMS9 266 aaPredicted RBP16.88■□□□□ 0.29
USP39-209ENST00000458268 MSX1P28360 303 aa16.88■□□□□ 0.29
USP39-209ENST00000458268 UQCRC1P31930 480 aa16.88■□□□□ 0.29
USP39-209ENST00000458268 SF3A3Q12874 501 aaKnown RBP eCLIP16.88■□□□□ 0.29
USP39-209ENST00000458268 SGCBQ16585 318 aa16.88■□□□□ 0.29
USP39-209ENST00000458268 ZPLD1Q8TCW7 415 aa16.88■□□□□ 0.29
USP39-209ENST00000458268 INTS12Q96CB8 462 aaKnown RBP16.88■□□□□ 0.29
USP39-209ENST00000458268 RNF145Q96MT1 663 aa16.88■□□□□ 0.29
USP39-209ENST00000458268 NPAS1Q99742 590 aa16.88■□□□□ 0.29
USP39-209ENST00000458268 PINK1Q9BXM7 581 aa16.88■□□□□ 0.29
USP39-209ENST00000458268 RMND5AQ9H871 391 aa16.88■□□□□ 0.29
USP39-209ENST00000458268 MED17Q9NVC6 651 aa16.88■□□□□ 0.29
USP39-209ENST00000458268 DCTN4Q9UJW0 460 aa16.88■□□□□ 0.29
USP39-209ENST00000458268 WDR45Q9Y484 360 aa16.88■□□□□ 0.29
USP39-209ENST00000458268 DTNAQ9Y4J8 743 aa16.88■□□□□ 0.29
USP39-209ENST00000458268 CENPEQ02224 2701 aa16.87■□□□□ 0.29
USP39-209ENST00000458268 MED12LQ86YW9 2145 aa16.87■□□□□ 0.29
USP39-209ENST00000458268 UQCRHLA0A096LP55 91 aa16.87■□□□□ 0.29
USP39-209ENST00000458268 IGLV3-32A0A0A0MS00 114 aa16.87■□□□□ 0.29
USP39-209ENST00000458268 CENPVL1A0A0U1RR11 272 aa16.87■□□□□ 0.29
USP39-209ENST00000458268 NR5A2O00482 541 aa16.87■□□□□ 0.29
USP39-209ENST00000458268 SOX30O94993 753 aa16.87■□□□□ 0.29
USP39-209ENST00000458268 AGR2O95994 175 aa16.87■□□□□ 0.29
USP39-209ENST00000458268 AK1P00568 194 aa16.87■□□□□ 0.29
USP39-209ENST00000458268 UBL4AP11441 157 aa16.87■□□□□ 0.29
USP39-209ENST00000458268 PRF1P14222 555 aa16.87■□□□□ 0.29
USP39-209ENST00000458268 ZNF136P52737 540 aa16.87■□□□□ 0.29
USP39-209ENST00000458268 SUCLG1P53597 346 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms