RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 HHLA2Q9UM44 414 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 POLQO75417 2590 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 MDFIC2A0A1B0GVS7 189 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 GABARAPH6UMI1 98 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 J3KR12 359 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 SELENOFO60613 162 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 GABARAPO95166 117 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 ENGP17813 658 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 CELP19835 753 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 BCKDHBP21953 392 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 PTAFRP25105 342 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 PRKAG1P54619 331 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 MAP2K5Q13163 448 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 FOXR1Q6PIV2 292 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 COX15Q7KZN9 410 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 KCNG3Q8TAE7 436 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 WDR48Q8TAF3 677 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 DHRS4Q9BTZ2 278 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 MCOLN1Q9GZU1 580 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 THSD1Q9NS62 852 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 TVP23BQ9NYZ1 205 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 CD300AQ9UGN4 299 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 TRDV1A0A1B0GX56 115 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 UPK3BL1B0FP48 263 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 UPK3BL2E5RIL1 263 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 SMAD6O43541 496 aaKnown RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 MMP3P08254 477 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 CALCBP10092 127 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 PGCP20142 388 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 IL3RAP26951 378 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 MPPED2Q15777 294 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF74Q16587 644 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 SLC35D3Q5M8T2 416 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 ABHD15Q6UXT9 468 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF852Q6ZMS4 543 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 FAM124AQ86V42 546 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 CACUL1Q86Y37 369 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 OR2L13Q8N349 312 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 LILRB2Q8N423 598 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 KIAA1958Q8N8K9 716 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 SUMF1Q8NBK3 374 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 OSMRQ99650 979 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 SLC6A17Q9H1V8 727 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 SRMSQ9H3Y6 488 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 NOTCH2Q04721 2471 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 TCRBV3S1A0A5B6 114 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF587BE7ETH6 402 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 CELF2O95319 508 aaKnown RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 EDN1P05305 212 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 OR2T7P0C7T2 308 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 DHRS4L1P0CG22 281 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 TACR2P21452 398 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 GABRA2P47869 451 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 TAS2R39P59534 338 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 PPM1JQ5JR12 505 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 WDR73Q6P4I2 378 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 PIWIL3Q7Z3Z3 882 aaKnown RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 ADGRG3Q86Y34 549 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 KCT2Q8NC54 265 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 OR5B17Q8NGF7 314 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 OR2T27Q8NH04 317 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 NDOR1Q9UHB4 597 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 SERTAD3Q9UJW9 196 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 U3KQV3 271 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 B4DEV8 164 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 HLA-AP01891 365 aaKnown RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 C1QBP02746 253 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 FBP1P09467 338 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 ATP1B2P14415 290 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 TGM1P22735 817 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 EIF1P41567 113 aaKnown RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 CLDN10P78369 228 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 DNASE1L3Q13609 305 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 CMC1Q7Z7K0 106 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 ADGRF3Q8IZF5 1079 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 ZFPM2Q8WW38 1151 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 SORCS1Q8WY21 1168 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 NUS1Q96E22 293 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 DAZAP1Q96EP5 407 aaKnown RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 GMPPAQ96IJ6 420 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 ADAD1Q96M93 576 aaKnown RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 MECRQ9BV79 373 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 ZFP37Q9Y6Q3 630 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 VWA8A3KMH1 1905 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 TECTAO75443 2155 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 ELOA3CA0A087WX78 387 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 SCG5P05408 212 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 MCCD1P59942 119 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 REEP5Q00765 189 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 PODNL1Q6PEZ8 512 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 DPPA2Q7Z7J5 298 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 ANKK1Q8NFD2 765 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 HSPBAP1Q96EW2 488 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 TEPSINQ96N21 525 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 C2orf42Q9NWW7 574 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 GMEB2Q9UKD1 530 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 RPH3AQ9Y2J0 694 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF337Q9Y3M9 751 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 hCG_1807616A0A1W2PRN6 198 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 DUSP11O75319 330 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms