RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 GATA6Q92908 595 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 BDH2Q9BUT1 245 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 SH2D2AQ9NP31 389 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 TEKT2Q9UIF3 430 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 H3BNH8 94 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 hCG_2039718K7EN88 272 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 M0R3H8 397 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 KLK10O43240 276 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 BAG2O95816 211 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 CST1P01037 141 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 GK3PQ14409 553 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 OR2T5Q6IEZ7 315 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 MISPQ8IVT2 679 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 SIRT6Q8N6T7 355 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 OR2T29Q8NH02 315 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 ASB15Q8WXK1 588 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 NR4A3Q92570 626 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 NTNG2Q96CW9 530 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 POLR2J2Q9GZM3 115 aaKnown RBP17.67■□□□□ 0.42
RPS28-202ENST00000449223 POLR2J3Q9H1A7 115 aaKnown RBP17.67■□□□□ 0.42
RPS28-202ENST00000449223 NTN4Q9HB63 628 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 STOML1Q9UBI4 398 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 PRDM4Q9UKN5 801 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 CHCHD2Q9Y6H1 151 aaPredicted RBP17.67■□□□□ 0.42
RPS28-202ENST00000449223 TP53I11O14683 189 aa17.66■□□□□ 0.42
RPS28-202ENST00000449223 BCAS1O75363 584 aaPredicted RBP17.66■□□□□ 0.42
RPS28-202ENST00000449223 OR6B1O95007 311 aa17.66■□□□□ 0.42
RPS28-202ENST00000449223 HOXD11P31277 338 aaPredicted RBP17.66■□□□□ 0.42
RPS28-202ENST00000449223 GCKP35557 465 aa17.66■□□□□ 0.42
RPS28-202ENST00000449223 RGS8P57771 180 aaPredicted RBP17.66■□□□□ 0.42
RPS28-202ENST00000449223 SNTA1Q13424 505 aa17.66■□□□□ 0.42
RPS28-202ENST00000449223 CD226Q15762 336 aa17.66■□□□□ 0.42
RPS28-202ENST00000449223 FCRLBQ6BAA4 426 aa17.66■□□□□ 0.42
RPS28-202ENST00000449223 RBM45Q8IUH3 476 aaKnown RBP17.66■□□□□ 0.42
RPS28-202ENST00000449223 ZNF440Q8IYI8 595 aa17.66■□□□□ 0.42
RPS28-202ENST00000449223 GALNT16Q8N428 558 aa17.66■□□□□ 0.42
RPS28-202ENST00000449223 ZNF614Q8N883 585 aa17.66■□□□□ 0.42
RPS28-202ENST00000449223 OR10G3Q8NGC4 313 aa17.66■□□□□ 0.42
RPS28-202ENST00000449223 GRHL3Q8TE85 626 aa17.66■□□□□ 0.42
RPS28-202ENST00000449223 CNOT9Q92600 299 aaKnown RBP17.66■□□□□ 0.42
RPS28-202ENST00000449223 SGCZQ96LD1 299 aa17.66■□□□□ 0.42
RPS28-202ENST00000449223 DHRS1Q96LJ7 313 aa17.66■□□□□ 0.42
RPS28-202ENST00000449223 NODALQ96S42 347 aa17.66■□□□□ 0.42
RPS28-202ENST00000449223 PIP5K1AQ99755 562 aa17.66■□□□□ 0.42
RPS28-202ENST00000449223 CCDC86Q9H6F5 360 aaKnown RBP17.66■□□□□ 0.42
RPS28-202ENST00000449223 TESQ9UGI8 421 aaKnown RBP17.66■□□□□ 0.42
RPS28-202ENST00000449223 ACACAQ13085 2346 aa17.66■□□□□ 0.42
RPS28-202ENST00000449223 ADAMDEC1O15204 470 aa17.65■□□□□ 0.42
RPS28-202ENST00000449223 TPST2O60704 377 aa17.65■□□□□ 0.42
RPS28-202ENST00000449223 CSTAP01040 98 aa17.65■□□□□ 0.42
RPS28-202ENST00000449223 UBL4AP11441 157 aa17.65■□□□□ 0.42
RPS28-202ENST00000449223 ITGA3P26006 1051 aa17.65■□□□□ 0.42
RPS28-202ENST00000449223 GAS1P54826 345 aa17.65■□□□□ 0.42
RPS28-202ENST00000449223 SKP2Q13309 424 aa17.65■□□□□ 0.42
RPS28-202ENST00000449223 SNCBQ16143 134 aa17.65■□□□□ 0.42
RPS28-202ENST00000449223 B3GNTL1Q67FW5 361 aaPredicted RBP17.65■□□□□ 0.42
RPS28-202ENST00000449223 ZNF550Q7Z398 422 aa17.65■□□□□ 0.42
RPS28-202ENST00000449223 APLFQ8IW19 511 aaPredicted RBP17.65■□□□□ 0.42
RPS28-202ENST00000449223 TMEM156Q8N614 296 aa17.65■□□□□ 0.42
RPS28-202ENST00000449223 PAQR8Q8TEZ7 354 aa17.65■□□□□ 0.42
RPS28-202ENST00000449223 PRRC1Q96M27 445 aa17.65■□□□□ 0.42
RPS28-202ENST00000449223 TBL1XR1Q9BZK7 514 aa17.65■□□□□ 0.42
RPS28-202ENST00000449223 RTN4RQ9BZR6 473 aa17.65■□□□□ 0.42
RPS28-202ENST00000449223 ING2Q9H160 280 aa17.65■□□□□ 0.42
RPS28-202ENST00000449223 HHATLQ9HCP6 504 aa17.65■□□□□ 0.42
RPS28-202ENST00000449223 A4GNTQ9UNA3 340 aa17.65■□□□□ 0.42
RPS28-202ENST00000449223 ARGFXA6NJG6 315 aa17.64■□□□□ 0.41
RPS28-202ENST00000449223 FAAHO00519 579 aa17.64■□□□□ 0.41
RPS28-202ENST00000449223 FFAR1O14842 300 aa17.64■□□□□ 0.41
RPS28-202ENST00000449223 ZNF264O43296 627 aa17.64■□□□□ 0.41
RPS28-202ENST00000449223 EIF4E2O60573 245 aaKnown RBP17.64■□□□□ 0.41
RPS28-202ENST00000449223 PRKAR1AP10644 381 aa17.64■□□□□ 0.41
RPS28-202ENST00000449223 EIF2S3P41091 472 aaKnown RBP17.64■□□□□ 0.41
RPS28-202ENST00000449223 CLK3P49761 638 aaKnown RBP17.64■□□□□ 0.41
RPS28-202ENST00000449223 HLCSP50747 726 aa17.64■□□□□ 0.41
RPS28-202ENST00000449223 HMGA2P52926 109 aa17.64■□□□□ 0.41
RPS28-202ENST00000449223 RPP38P78345 283 aaKnown RBP17.64■□□□□ 0.41
RPS28-202ENST00000449223 AMIGO2Q86SJ2 522 aa17.64■□□□□ 0.41
RPS28-202ENST00000449223 RANBP3LQ86VV4 465 aaPredicted RBP17.64■□□□□ 0.41
RPS28-202ENST00000449223 CYP4Z1Q86W10 505 aa17.64■□□□□ 0.41
RPS28-202ENST00000449223 VANGL1Q8TAA9 524 aaPredicted RBP17.64■□□□□ 0.41
RPS28-202ENST00000449223 FRMD6Q96NE9 622 aa17.64■□□□□ 0.41
RPS28-202ENST00000449223 LAT2Q9GZY6 243 aa17.64■□□□□ 0.41
RPS28-202ENST00000449223 FAM32AQ9Y421 112 aaKnown RBP17.64■□□□□ 0.41
RPS28-202ENST00000449223 HEATR5AQ86XA9 2040 aa17.64■□□□□ 0.41
RPS28-202ENST00000449223 FRYQ5TBA9 3013 aa17.64■□□□□ 0.41
RPS28-202ENST00000449223 ANKRD33BA6NCL7 494 aa17.63■□□□□ 0.41
RPS28-202ENST00000449223 FRS3O43559 492 aa17.63■□□□□ 0.41
RPS28-202ENST00000449223 NDUFB5O43674 189 aa17.63■□□□□ 0.41
RPS28-202ENST00000449223 ANGPTL1O95841 491 aa17.63■□□□□ 0.41
RPS28-202ENST00000449223 PTGDSP41222 190 aa17.63■□□□□ 0.41
RPS28-202ENST00000449223 ACAA2P42765 397 aaKnown RBP17.63■□□□□ 0.41
RPS28-202ENST00000449223 OGFRL1Q5TC84 451 aaPredicted RBP17.63■□□□□ 0.41
RPS28-202ENST00000449223 DEF8Q6ZN54 512 aa17.63■□□□□ 0.41
RPS28-202ENST00000449223 TSPYL5Q86VY4 417 aaPredicted RBP17.63■□□□□ 0.41
RPS28-202ENST00000449223 OFCC1Q8IZS5 231 aa17.63■□□□□ 0.41
RPS28-202ENST00000449223 LSMEM1Q8N8F7 131 aa17.63■□□□□ 0.41
RPS28-202ENST00000449223 TOR1AIP2Q8NFQ8 470 aa17.63■□□□□ 0.41
RPS28-202ENST00000449223 PHOSPHO1Q8TCT1 267 aa17.63■□□□□ 0.41
RPS28-202ENST00000449223 CPNE5Q9HCH3 593 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms