RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 BCKDKO14874 412 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 BCAS1O75363 584 aaPredicted RBP12.12□□□□□ -0.47
SNHG4-201ENST00000448190 NUDT14O95848 222 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 AK1P00568 194 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 LDLRP01130 860 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 HOXB9P17482 250 aaPredicted RBP12.12□□□□□ -0.47
SNHG4-201ENST00000448190 ANXA11P50995 505 aaKnown RBP12.12□□□□□ -0.47
SNHG4-201ENST00000448190 B3GALT5-AS1P59052 145 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 DSTNP60981 165 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 IRX1P78414 480 aaPredicted RBP12.12□□□□□ -0.47
SNHG4-201ENST00000448190 ZNF117Q03924 483 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 CRYZQ08257 329 aaKnown RBP12.12□□□□□ -0.47
SNHG4-201ENST00000448190 PMPCAQ10713 525 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 CAPRIN1Q14444 709 aaKnown RBP12.12□□□□□ -0.47
SNHG4-201ENST00000448190 LRIF1Q5T3J3 769 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 RAET1LQ5VY80 246 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 VASNQ6EMK4 673 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 RTL6Q6ICC9 239 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 PLXDC2Q6UX71 529 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 FRRS1Q6ZNA5 592 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 MTDHQ86UE4 582 aaKnown RBP12.12□□□□□ -0.47
SNHG4-201ENST00000448190 IFNEQ86WN2 208 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 MARVELD2Q8N4S9 558 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 ZNF527Q8NB42 609 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 B4GALNT2Q8NHY0 566 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 ZNF524Q96C55 264 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 C1GALT1C1Q96EU7 318 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 WDYHV1Q96HA8 205 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 SFXN2Q96NB2 322 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 TRNT1Q96Q11 434 aaKnown RBP12.12□□□□□ -0.47
SNHG4-201ENST00000448190 ZNF350Q9GZX5 532 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 IKZF5Q9H5V7 419 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 RUBCNLQ9H714 662 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 LEF1Q9UJU2 399 aaPredicted RBP12.12□□□□□ -0.47
SNHG4-201ENST00000448190 ZNF337Q9Y3M9 751 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 SVILO95425 2214 aa12.12□□□□□ -0.47
SNHG4-201ENST00000448190 BAHCC1Q9P281 2608 aa12.11□□□□□ -0.47
SNHG4-201ENST00000448190 IGLV3-32A0A0A0MS00 114 aa12.11□□□□□ -0.47
SNHG4-201ENST00000448190 A0A1W2PQD3 144 aa12.11□□□□□ -0.47
SNHG4-201ENST00000448190 H3BNH8 94 aa12.11□□□□□ -0.47
SNHG4-201ENST00000448190 TFPTP0C1Z6 253 aa12.11□□□□□ -0.47
SNHG4-201ENST00000448190 ACVR2AP27037 513 aa12.11□□□□□ -0.47
SNHG4-201ENST00000448190 HPCAP84074 193 aa12.11□□□□□ -0.47
SNHG4-201ENST00000448190 ADORA2A-AS1P86434 159 aa12.11□□□□□ -0.47
SNHG4-201ENST00000448190 NFYCQ13952 458 aa12.11□□□□□ -0.47
SNHG4-201ENST00000448190 SELPLGQ14242 412 aa12.11□□□□□ -0.47
SNHG4-201ENST00000448190 TOMM34Q15785 309 aaPredicted RBP12.11□□□□□ -0.47
SNHG4-201ENST00000448190 ZNF141Q15928 474 aa12.11□□□□□ -0.47
SNHG4-201ENST00000448190 RUNDC3AQ59EK9 446 aa12.11□□□□□ -0.47
SNHG4-201ENST00000448190 RPS26P11Q5JNZ5 115 aaPredicted RBP12.11□□□□□ -0.47
SNHG4-201ENST00000448190 RPTNQ6XPR3 784 aa12.11□□□□□ -0.47
SNHG4-201ENST00000448190 LSRQ86X29 649 aaPredicted RBP12.11□□□□□ -0.47
SNHG4-201ENST00000448190 SNX32Q86XE0 403 aa12.11□□□□□ -0.47
SNHG4-201ENST00000448190 ULK2Q8IYT8 1036 aa12.11□□□□□ -0.47
SNHG4-201ENST00000448190 UBQLNLQ8IYU4 475 aa12.11□□□□□ -0.47
SNHG4-201ENST00000448190 ZNF619Q8N2I2 560 aa12.11□□□□□ -0.47
SNHG4-201ENST00000448190 TMCO5AQ8N6Q1 288 aa12.11□□□□□ -0.47
SNHG4-201ENST00000448190 POU5F2Q8N7G0 328 aa12.11□□□□□ -0.47
SNHG4-201ENST00000448190 SLC38A5Q8WUX1 472 aa12.11□□□□□ -0.47
SNHG4-201ENST00000448190 SAP130Q9H0E3 1048 aa12.11□□□□□ -0.47
SNHG4-201ENST00000448190 SLC38A1Q9H2H9 487 aa12.11□□□□□ -0.47
SNHG4-201ENST00000448190 TP63Q9H3D4 680 aaPredicted RBP12.11□□□□□ -0.47
SNHG4-201ENST00000448190 MTHFD2LQ9H903 347 aaPredicted RBP12.11□□□□□ -0.47
SNHG4-201ENST00000448190 SUCOQ9UBS9 1254 aaKnown RBP12.11□□□□□ -0.47
SNHG4-201ENST00000448190 LIPT1Q9Y234 373 aa12.11□□□□□ -0.47
SNHG4-201ENST00000448190 USP9XQ93008 2570 aaPredicted RBP12.11□□□□□ -0.47
SNHG4-201ENST00000448190 POLEQ07864 2286 aa12.11□□□□□ -0.47
SNHG4-201ENST00000448190 ESPL1Q14674 2120 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 TRBV5-3A0A0A0MS03 114 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 OR2M5A3KFT3 312 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 WIPF3A6NGB9 483 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 E9PLN8 166 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 H0YC42 278 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 KIAA0513O60268 411 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 CSTAP01040 98 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 BCHEP06276 602 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 UBTFL6P0CB48 400 aaPredicted RBP12.1□□□□□ -0.47
SNHG4-201ENST00000448190 MSX1P28360 303 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 RYKP34925 604 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 GCKP35557 465 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 CCR4P51679 360 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 TPD52P55327 224 aaPredicted RBP12.1□□□□□ -0.47
SNHG4-201ENST00000448190 GFRA1P56159 465 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 PER3P56645 1201 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 ZNF630Q2M218 657 aaPredicted RBP12.1□□□□□ -0.47
SNHG4-201ENST00000448190 MMEL1Q495T6 779 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 LRRC74BQ6ZQY2 392 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 MRGPRGQ86SM5 289 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 DHDDSQ86SQ9 333 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 CCDC71Q8IV32 467 aaPredicted RBP12.1□□□□□ -0.47
SNHG4-201ENST00000448190 OR10Q1Q8NGQ4 319 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 SMPDL3BQ92485 455 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 CNOT9Q92600 299 aaKnown RBP12.1□□□□□ -0.47
SNHG4-201ENST00000448190 TMEM19Q96HH6 336 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 DMRTA2Q96SC8 542 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 VKORC1Q9BQB6 163 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 SLC39A3Q9BRY0 314 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 THUMPD3Q9BV44 507 aaKnown RBP12.1□□□□□ -0.47
SNHG4-201ENST00000448190 PIF1Q9H611 641 aa12.1□□□□□ -0.47
SNHG4-201ENST00000448190 MED17Q9NVC6 651 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms