RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 LUMP51884 338 aaPredicted RBP4.71□□□□□ -1.66
HERC1-201ENST00000443617 MARCH8Q5T0T0 291 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 SSX6Q7RTT6 188 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 CBLN2Q8IUK8 224 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 GLB1L2Q8IW92 636 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 AHCYL2Q96HN2 611 aaKnown RBP4.71□□□□□ -1.66
HERC1-201ENST00000443617 TBX5Q99593 518 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 P2RX2Q9UBL9 471 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 GPR160Q9UJ42 338 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 PRPH2P23942 346 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 SLBPQ14493 270 aaKnown RBP eCLIP4.71□□□□□ -1.66
HERC1-201ENST00000443617 INSL4Q14641 139 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 UPP1Q16831 310 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 TCTN3Q6NUS6 607 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 RPL13AP3Q6NVV1 102 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 PPP1R16AQ96I34 528 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 BCL2L14Q9BZR8 327 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 BRD9Q9H8M2 597 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 CHMP1AQ9HD42 196 aaPredicted RBP4.71□□□□□ -1.66
HERC1-201ENST00000443617 ADCYAP1R1P41586 468 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 PTPRRQ15256 657 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 EIF2S3LQ2VIR3 472 aaKnown RBP4.71□□□□□ -1.66
HERC1-201ENST00000443617 PRAMEF19Q5SWL8 479 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 MOB3CQ70IA8 216 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 SMPDL3BQ92485 455 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 SLC6A16Q9GZN6 736 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 ENKD1Q9H0I2 346 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 ABRACLQ9P1F3 81 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 KLHL9Q9P2J3 617 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 GJD2Q9UKL4 321 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 FBXL3Q9UKT7 428 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 COL4A1P02462 1669 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 PIKFYVEQ9Y2I7 2098 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 ZNF821O75541 412 aaPredicted RBP4.71□□□□□ -1.66
HERC1-201ENST00000443617 GALP22466 123 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 MRPS6P82932 125 aaKnown RBP4.71□□□□□ -1.66
HERC1-201ENST00000443617 MLLT1Q03111 559 aaPredicted RBP4.71□□□□□ -1.66
HERC1-201ENST00000443617 CDK20Q8IZL9 346 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 CMTM4Q8IZR5 234 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 OR8S1Q8NH09 359 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 OR51Q1Q8NH59 317 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 SNX33Q8WV41 574 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 ZCCHC2Q9C0B9 1178 aaKnown RBP4.71□□□□□ -1.66
HERC1-201ENST00000443617 ZNF350Q9GZX5 532 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 ELP3Q9H9T3 547 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 NPTNQ9Y639 398 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 KIF13BQ9NQT8 1826 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 KCNE1BA0A087WTH5 132 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 SYNDIG1LA6NDD5 238 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 SLC1A3P43003 542 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 DHODHQ02127 395 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 HMGN3Q15651 99 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 MPPED2Q15777 294 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 AGTRAPQ6RW13 159 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 CHST9Q7L1S5 443 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 FAM46AQ96IP4 442 aaKnown RBP4.71□□□□□ -1.66
HERC1-201ENST00000443617 MED17Q9NVC6 651 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 NEU3Q9UQ49 428 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 COL18A1P39060 1754 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 NUDT19A8MXV4 375 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 IGLV3-25P01717 112 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 SLC36A2Q495M3 483 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 SLC6A19Q695T7 634 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 SLC16A13Q7RTY0 426 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 NAA40Q86UY6 237 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 HORMAD2Q8N7B1 307 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 UBL7Q96S82 380 aaPredicted RBP4.71□□□□□ -1.66
HERC1-201ENST00000443617 KCND3Q9UK17 655 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 ANHXE9PGG2 379 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 PRKAR2AP13861 404 aaKnown RBP4.7□□□□□ -1.66
HERC1-201ENST00000443617 PSEN2P49810 448 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 FAM74A1Q5RGS3 127 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 OR5M9Q8NGP3 310 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 PDGFDQ9GZP0 370 aaPredicted RBP4.7□□□□□ -1.66
HERC1-201ENST00000443617 DPP7Q9UHL4 492 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 M0R3H8 397 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 ARL6IP5O75915 188 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 FGBP02675 491 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 PSMA3P25788 255 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 USF2Q15853 346 aaPredicted RBP4.7□□□□□ -1.66
HERC1-201ENST00000443617 XKR4Q5GH76 650 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 LAS2Q8IYD9 372 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 ZNF614Q8N883 585 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 SGK3Q96BR1 496 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 ST8SIA6P61647 398 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 SORDQ00796 357 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 BDH1Q02338 343 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 FAM98AQ8NCA5 519 aaKnown RBP4.7□□□□□ -1.66
HERC1-201ENST00000443617 GOT1L1Q8NHS2 421 aaPredicted RBP4.7□□□□□ -1.66
HERC1-201ENST00000443617 OR5P2Q8WZ92 322 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 SAMD8Q96LT4 415 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 TMEM121BQ9BXQ6 578 aaPredicted RBP4.7□□□□□ -1.66
HERC1-201ENST00000443617 APC2O95996 2303 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 SELENOFO60613 162 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 BCHEP06276 602 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 ACP5P13686 325 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 GKP32189 559 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 RGRP47804 291 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 PPT1P50897 306 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 RAB5CP51148 216 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms