RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 MED17Q9NVC6 651 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 GNG14A0A1W2PPG7 69 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 GXYLT2A0PJZ3 443 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 TTC36A6NLP5 189 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 RAD51CO43502 376 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 WIPF1O43516 503 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 EFNA2O43921 213 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 DLX3O60479 287 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 JUNP05412 331 aaKnown RBP12.75□□□□□ -0.37
HMGN1-208ENST00000443046 PTNP21246 168 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 SHC1P29353 583 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 TIA1P31483 386 aaKnown RBP eCLIP12.75□□□□□ -0.372e-6■■□□□ 12.1
HMGN1-208ENST00000443046 NCBP2P52298 156 aaKnown RBP eCLIP12.75□□□□□ -0.37
HMGN1-208ENST00000443046 PLTPP55058 493 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 MANFP55145 182 aaKnown RBP12.75□□□□□ -0.37
HMGN1-208ENST00000443046 SLC18A2Q05940 514 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 SPIN4Q56A73 249 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 AGAP6Q5VW22 663 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 CYB5R2Q6BCY4 276 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 CLEC2AQ6UVW9 174 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 ZDHHC24Q6UX98 284 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 LILRA2Q8N149 483 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 BANPQ8N9N5 519 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 OR4C3Q8NH37 302 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 SLC9A6Q92581 669 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 ADAD1Q96M93 576 aaKnown RBP12.75□□□□□ -0.37
HMGN1-208ENST00000443046 KLHL15Q96M94 604 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 SRXN1Q9BYN0 137 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 GLIPR2Q9H4G4 154 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 TMEM185BQ9H7F4 350 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 RNF14Q9UBS8 474 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 ING1Q9UK53 422 aaPredicted RBP12.75□□□□□ -0.37
HMGN1-208ENST00000443046 GRID1Q9ULK0 1009 aa12.75□□□□□ -0.37
HMGN1-208ENST00000443046 A8MT66 165 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 NDUFB5O43674 189 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 LMX1BO60663 402 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 ULK1O75385 1050 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 OXSR1O95747 527 aaPredicted RBP12.74□□□□□ -0.37
HMGN1-208ENST00000443046 KRT6AP02538 564 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 KRT6BP04259 564 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 YES1P07947 543 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 LINGO3P0C6S8 592 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 IGFBP5P24593 272 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 TTKP33981 857 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 GABRA3P34903 492 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 PAFAH1B1P43034 410 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 KRT6CP48668 564 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 CDH11P55287 796 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 CAV1Q03135 178 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 SLC29A2Q14542 456 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 PPA1Q15181 289 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 ZNHIT3Q15649 155 aaPredicted RBP12.74□□□□□ -0.37
HMGN1-208ENST00000443046 Q6ZT83 130 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 BHLHA15Q7RTS1 189 aaPredicted RBP12.74□□□□□ -0.37
HMGN1-208ENST00000443046 CCDC25Q86WR0 208 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 CDYL2Q8N8U2 506 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 FAM110BQ8TC76 370 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 C10orf105Q8TEF2 133 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 PROX1Q92786 737 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 CPNE4Q96A23 557 aaPredicted RBP12.74□□□□□ -0.37
HMGN1-208ENST00000443046 MRRFQ96E11 262 aaKnown RBP12.74□□□□□ -0.37
HMGN1-208ENST00000443046 AMDHD1Q96NU7 426 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 MRPL57Q9BQC6 102 aaKnown RBP12.74□□□□□ -0.37
HMGN1-208ENST00000443046 CACNG6Q9BXT2 260 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 C3orf14Q9HBI5 128 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 DDX18Q9NVP1 670 aaKnown RBP12.74□□□□□ -0.37
HMGN1-208ENST00000443046 NPAP1Q9NZP6 1156 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 NFU1Q9UMS0 254 aa12.74□□□□□ -0.37
HMGN1-208ENST00000443046 PKD1L1Q8TDX9 2849 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 SERTM1A2A2V5 107 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 E7EQL1 145 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 ABCD4O14678 606 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 PRKD3O94806 890 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 NKX2-2O95096 273 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 KCNH1O95259 989 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 PGM3O95394 542 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 PYGBP11216 843 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 COL6A2P12110 1019 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 ZNF16P17020 682 aaPredicted RBP12.73□□□□□ -0.37
HMGN1-208ENST00000443046 SRD5A1P18405 259 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 ME2P23368 584 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 RFX3P48380 749 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 CLCQ05315 142 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 ACSM2AQ08AH3 577 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 RASA2Q15283 850 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 TRADDQ15628 312 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 TSNAXIP1Q2TAA8 658 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 GLE1Q53GS7 698 aaKnown RBP12.73□□□□□ -0.37
HMGN1-208ENST00000443046 ACSM2BQ68CK6 577 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 FAM71E1Q6IPT2 247 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 Q6ZSR9 355 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 SSX8Q7RTT4 187 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 ZNF525Q8N782 197 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 PIK3R3Q92569 461 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 RADILQ96JH8 1075 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 ZNF382Q96SR6 550 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 BCO1Q9HAY6 547 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 TIGARQ9NQ88 270 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 CBLN4Q9NTU7 201 aa12.73□□□□□ -0.37
HMGN1-208ENST00000443046 H7C417 338 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms