RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 CLDN20P56880 219 aa19.01■□□□□ 0.63
CDKN3-204ENST00000442975 KRTAP10-9P60411 292 aa19.01■□□□□ 0.63
CDKN3-204ENST00000442975 OCRLQ01968 901 aa19.01■□□□□ 0.63
CDKN3-204ENST00000442975 DPY19L1Q2PZI1 675 aa19.01■□□□□ 0.63
CDKN3-204ENST00000442975 PPP4R4Q6NUP7 873 aa19.01■□□□□ 0.63
CDKN3-204ENST00000442975 POMZP3Q6PJE2 187 aa19.01■□□□□ 0.63
CDKN3-204ENST00000442975 SPATA19Q7Z5L4 167 aa19.01■□□□□ 0.63
CDKN3-204ENST00000442975 B4GALNT2Q8NHY0 566 aa19.01■□□□□ 0.63
CDKN3-204ENST00000442975 MARK4Q96L34 752 aa19.01■□□□□ 0.63
CDKN3-204ENST00000442975 ZFP3Q96NJ6 502 aa19.01■□□□□ 0.63
CDKN3-204ENST00000442975 ZBTB18Q99592 522 aa19.01■□□□□ 0.63
CDKN3-204ENST00000442975 SH3GL2Q99962 352 aa19.01■□□□□ 0.63
CDKN3-204ENST00000442975 SFXN3Q9BWM7 321 aa19.01■□□□□ 0.63
CDKN3-204ENST00000442975 SLC24A3Q9HC58 644 aa19.01■□□□□ 0.63
CDKN3-204ENST00000442975 MCCC2Q9HCC0 563 aa19.01■□□□□ 0.63
CDKN3-204ENST00000442975 MED17Q9NVC6 651 aa19.01■□□□□ 0.63
CDKN3-204ENST00000442975 KCNN3Q9UGI6 736 aa19.01■□□□□ 0.63
CDKN3-204ENST00000442975 CREBBPQ92793 2442 aa19■□□□□ 0.63
CDKN3-204ENST00000442975 A0A087WZY1 265 aa19■□□□□ 0.63
CDKN3-204ENST00000442975 PRSS51A0A1B0GVH4 220 aa19■□□□□ 0.63
CDKN3-204ENST00000442975 A0A1W2PQD3 144 aa19■□□□□ 0.63
CDKN3-204ENST00000442975 SLCO1B7G3V0H7 640 aa19■□□□□ 0.63
CDKN3-204ENST00000442975 H3BNH8 94 aa19■□□□□ 0.63
CDKN3-204ENST00000442975 LINC01387J3KSC0 135 aa19■□□□□ 0.63
CDKN3-204ENST00000442975 TGM6O95932 706 aa19■□□□□ 0.63
CDKN3-204ENST00000442975 ZNF17P17021 662 aa19■□□□□ 0.63
CDKN3-204ENST00000442975 MATN1P21941 496 aa19■□□□□ 0.63
CDKN3-204ENST00000442975 CHI3L1P36222 383 aaPredicted RBP19■□□□□ 0.63
CDKN3-204ENST00000442975 EEFSECP57772 596 aaKnown RBP19■□□□□ 0.63
CDKN3-204ENST00000442975 UFM1P61960 85 aa19■□□□□ 0.63
CDKN3-204ENST00000442975 GLYR1Q49A26 553 aaPredicted RBP19■□□□□ 0.63
CDKN3-204ENST00000442975 C16orf62Q7Z3J2 963 aa19■□□□□ 0.63
CDKN3-204ENST00000442975 TMEM200AQ86VY9 491 aa19■□□□□ 0.63
CDKN3-204ENST00000442975 ZZZ3Q8IYH5 903 aa19■□□□□ 0.63
CDKN3-204ENST00000442975 TEX37Q96LM6 180 aa19■□□□□ 0.63
CDKN3-204ENST00000442975 PINK1Q9BXM7 581 aa19■□□□□ 0.63
CDKN3-204ENST00000442975 HOXD1Q9GZZ0 328 aa19■□□□□ 0.63
CDKN3-204ENST00000442975 ACBD3Q9H3P7 528 aa19■□□□□ 0.63
CDKN3-204ENST00000442975 TMEM185BQ9H7F4 350 aa19■□□□□ 0.63
CDKN3-204ENST00000442975 CSMD2Q7Z408 3487 aa18.99■□□□□ 0.63
CDKN3-204ENST00000442975 TNFRSF21O75509 655 aa18.99■□□□□ 0.63
CDKN3-204ENST00000442975 SOX30O94993 753 aa18.99■□□□□ 0.63
CDKN3-204ENST00000442975 RCBTB2O95199 551 aa18.99■□□□□ 0.63
CDKN3-204ENST00000442975 NUDT14O95848 222 aa18.99■□□□□ 0.63
CDKN3-204ENST00000442975 IL18BPO95998 194 aa18.99■□□□□ 0.63
CDKN3-204ENST00000442975 KIR2DL3P43628 341 aa18.99■□□□□ 0.63
CDKN3-204ENST00000442975 CPA2P48052 419 aa18.99■□□□□ 0.63
CDKN3-204ENST00000442975 SUCLG1P53597 346 aaKnown RBP18.99■□□□□ 0.63
CDKN3-204ENST00000442975 PHC1P78364 1004 aa18.99■□□□□ 0.63
CDKN3-204ENST00000442975 ZNF117Q03924 483 aa18.99■□□□□ 0.63
CDKN3-204ENST00000442975 PLPPR5Q32ZL2 321 aa18.99■□□□□ 0.63
CDKN3-204ENST00000442975 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.99■□□□□ 0.63
CDKN3-204ENST00000442975 TNFAIP8L2Q6P589 184 aaPredicted RBP18.99■□□□□ 0.63
CDKN3-204ENST00000442975 LUZP2Q86TE4 346 aa18.99■□□□□ 0.63
CDKN3-204ENST00000442975 TMCO5AQ8N6Q1 288 aa18.99■□□□□ 0.63
CDKN3-204ENST00000442975 ZBTB8AQ96BR9 441 aa18.99■□□□□ 0.63
CDKN3-204ENST00000442975 RNF145Q96MT1 663 aa18.99■□□□□ 0.63
CDKN3-204ENST00000442975 UCN2Q96RP3 112 aa18.99■□□□□ 0.63
CDKN3-204ENST00000442975 KLHDC3Q9BQ90 382 aa18.99■□□□□ 0.63
CDKN3-204ENST00000442975 OR51I1Q9H343 314 aa18.99■□□□□ 0.63
CDKN3-204ENST00000442975 AP4B1Q9Y6B7 739 aa18.99■□□□□ 0.63
CDKN3-204ENST00000442975 DUXAA6NLW8 204 aa18.98■□□□□ 0.63
CDKN3-204ENST00000442975 SYT5O00445 386 aa18.98■□□□□ 0.63
CDKN3-204ENST00000442975 EIF1AYO14602 144 aaKnown RBP18.98■□□□□ 0.63
CDKN3-204ENST00000442975 OIP5O43482 229 aa18.98■□□□□ 0.63
CDKN3-204ENST00000442975 SCN2BO60939 215 aa18.98■□□□□ 0.63
CDKN3-204ENST00000442975 UQCRC2P22695 453 aa18.98■□□□□ 0.63
CDKN3-204ENST00000442975 ATP12AP54707 1039 aa18.98■□□□□ 0.63
CDKN3-204ENST00000442975 CLDN15P56746 228 aa18.98■□□□□ 0.63
CDKN3-204ENST00000442975 RPS3AP61247 264 aaKnown RBP18.98■□□□□ 0.63
CDKN3-204ENST00000442975 TMEM44Q2T9K0 475 aa18.98■□□□□ 0.63
CDKN3-204ENST00000442975 NDUFAF6Q330K2 333 aa18.98■□□□□ 0.63
CDKN3-204ENST00000442975 FBXL19-AS1Q494R0 122 aa18.98■□□□□ 0.63
CDKN3-204ENST00000442975 SLC9B1Q4ZJI4 515 aa18.98■□□□□ 0.63
CDKN3-204ENST00000442975 OLIG3Q7RTU3 272 aa18.98■□□□□ 0.63
CDKN3-204ENST00000442975 MAVSQ7Z434 540 aa18.98■□□□□ 0.63
CDKN3-204ENST00000442975 GTPBP8Q8N3Z3 284 aaPredicted RBP18.98■□□□□ 0.63
CDKN3-204ENST00000442975 GOLGA6L1Q8N7Z2 621 aa18.98■□□□□ 0.63
CDKN3-204ENST00000442975 CNEP1R1Q8N9A8 125 aa18.98■□□□□ 0.63
CDKN3-204ENST00000442975 ACTRT2Q8TDY3 377 aa18.98■□□□□ 0.63
CDKN3-204ENST00000442975 FIG4Q92562 907 aa18.98■□□□□ 0.63
CDKN3-204ENST00000442975 ZNF75CPQ92670 426 aaPredicted RBP18.98■□□□□ 0.63
CDKN3-204ENST00000442975 ZNF845Q96IR2 970 aaPredicted RBP18.98■□□□□ 0.63
CDKN3-204ENST00000442975 ATP6V1G3Q96LB4 118 aa18.98■□□□□ 0.63
CDKN3-204ENST00000442975 NPAS1Q99742 590 aa18.98■□□□□ 0.63
CDKN3-204ENST00000442975 SLC35A5Q9BS91 424 aa18.98■□□□□ 0.63
CDKN3-204ENST00000442975 EXD2Q9NVH0 621 aa18.98■□□□□ 0.63
CDKN3-204ENST00000442975 STOML1Q9UBI4 398 aa18.98■□□□□ 0.63
CDKN3-204ENST00000442975 CARD8Q9Y2G2 431 aa18.98■□□□□ 0.63
CDKN3-204ENST00000442975 GPR45Q9Y5Y3 372 aa18.98■□□□□ 0.63
CDKN3-204ENST00000442975 POLQO75417 2590 aa18.97■□□□□ 0.63
CDKN3-204ENST00000442975 FREM3P0C091 2139 aa18.97■□□□□ 0.63
CDKN3-204ENST00000442975 A0A1W2PNV4 684 aa18.97■□□□□ 0.63
CDKN3-204ENST00000442975 GTPBP1O00178 669 aaKnown RBP18.97■□□□□ 0.63
CDKN3-204ENST00000442975 DIAPH2O60879 1101 aa18.97■□□□□ 0.63
CDKN3-204ENST00000442975 AK1P00568 194 aa18.97■□□□□ 0.63
CDKN3-204ENST00000442975 OPN1LWP04000 364 aa18.97■□□□□ 0.63
CDKN3-204ENST00000442975 ME2P23368 584 aa18.97■□□□□ 0.63
CDKN3-204ENST00000442975 CPOXP36551 454 aa18.97■□□□□ 0.63
CDKN3-204ENST00000442975 EIF1AXP47813 144 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms