RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 ATE1O95260 518 aa7□□□□□ -1.29
CD44-211ENST00000442151 AGR2O95994 175 aa7□□□□□ -1.29
CD44-211ENST00000442151 AK1P00568 194 aa7□□□□□ -1.29
CD44-211ENST00000442151 FREM3P0C091 2139 aa7□□□□□ -1.29
CD44-211ENST00000442151 PRPS1L1P21108 318 aa7□□□□□ -1.29
CD44-211ENST00000442151 CRYGSP22914 178 aa7□□□□□ -1.29
CD44-211ENST00000442151 FKBP2P26885 142 aaKnown RBP7□□□□□ -1.29
CD44-211ENST00000442151 FRKP42685 505 aaPredicted RBP7□□□□□ -1.29
CD44-211ENST00000442151 EIF1AXP47813 144 aaKnown RBP7□□□□□ -1.29
CD44-211ENST00000442151 FOXA1P55317 472 aa7□□□□□ -1.29
CD44-211ENST00000442151 CLDN15P56746 228 aa7□□□□□ -1.29
CD44-211ENST00000442151 NKX6-1P78426 367 aaPredicted RBP7□□□□□ -1.29
CD44-211ENST00000442151 FOXF2Q12947 444 aa7□□□□□ -1.29
CD44-211ENST00000442151 RNPS1Q15287 305 aaKnown RBP7□□□□□ -1.29
CD44-211ENST00000442151 GRAMD1BQ3KR37 738 aa7□□□□□ -1.29
CD44-211ENST00000442151 SPDYE7PQ495Y7 208 aa7□□□□□ -1.29
CD44-211ENST00000442151 ZNF551Q7Z340 670 aaPredicted RBP7□□□□□ -1.29
CD44-211ENST00000442151 GCNT2Q8N0V5 402 aa7□□□□□ -1.29
CD44-211ENST00000442151 GTPBP8Q8N3Z3 284 aaPredicted RBP7□□□□□ -1.29
CD44-211ENST00000442151 APOPT1Q96IL0 206 aa7□□□□□ -1.29
CD44-211ENST00000442151 GATA5Q9BWX5 397 aaPredicted RBP7□□□□□ -1.29
CD44-211ENST00000442151 ACTRT3Q9BYD9 372 aa7□□□□□ -1.29
CD44-211ENST00000442151 PIGUQ9H490 435 aa7□□□□□ -1.29
CD44-211ENST00000442151 PLEKHF2Q9H8W4 249 aa7□□□□□ -1.29
CD44-211ENST00000442151 ANKRA2Q9H9E1 313 aa7□□□□□ -1.29
CD44-211ENST00000442151 PRDM4Q9UKN5 801 aa7□□□□□ -1.29
CD44-211ENST00000442151 NCKAP5O14513 1909 aa7□□□□□ -1.29
CD44-211ENST00000442151 APCP25054 2843 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 EIF1AYO14602 144 aaKnown RBP6.99□□□□□ -1.29
CD44-211ENST00000442151 AKAP10O43572 662 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 TNFSF13O75888 250 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 OXSR1O95747 527 aaPredicted RBP6.99□□□□□ -1.29
CD44-211ENST00000442151 TGM6O95932 706 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 TUBBP07437 444 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 NUDT17P0C025 328 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 LINC00032P0C843 101 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 ELK4P28324 431 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 ADSLP30566 484 aaPredicted RBP6.99□□□□□ -1.29
CD44-211ENST00000442151 UGT2B10P36537 528 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 KIR2DL2P43627 348 aaPredicted RBP6.99□□□□□ -1.29
CD44-211ENST00000442151 CCT3P49368 545 aaKnown RBP6.99□□□□□ -1.29
CD44-211ENST00000442151 CARD18P57730 90 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 RPL38P63173 70 aaKnown RBP6.99□□□□□ -1.29
CD44-211ENST00000442151 SNTB1Q13884 538 aaKnown RBP6.99□□□□□ -1.29
CD44-211ENST00000442151 PDE7AQ13946 482 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 PON3Q15166 354 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 ACKR1Q16570 336 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 GALNTL6Q49A17 601 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 BEX5Q5H9J7 111 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 TMEM201Q5SNT2 666 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 KANK2Q63ZY3 851 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 PPP4R4Q6NUP7 873 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 CDC73Q6P1J9 531 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 BTLAQ7Z6A9 289 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 RETREG3Q86VR2 466 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 SLC43A2Q8N370 569 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 TOR1AIP2Q8NFQ8 470 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 STEAP2Q8NFT2 490 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 OR2V1Q8NHB1 315 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 SFXN5Q8TD22 340 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 TSSK3Q96PN8 268 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 KRTAP4-9Q9BYQ8 210 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 BHLHE41Q9C0J9 482 aaPredicted RBP6.99□□□□□ -1.29
CD44-211ENST00000442151 EQTNQ9NQ60 294 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 SERINC1Q9NRX5 453 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 ZCCHC3Q9NUD5 404 aaKnown RBP6.99□□□□□ -1.29
CD44-211ENST00000442151 EXD2Q9NVH0 621 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 FIS1Q9Y3D6 152 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 CCL27Q9Y4X3 112 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 GPC6Q9Y625 555 aaPredicted RBP6.99□□□□□ -1.29
CD44-211ENST00000442151 F8P00451 2351 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 EXPH5Q8NEV8 1989 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 KDM4EB2RXH2 506 aaPredicted RBP6.99□□□□□ -1.29
CD44-211ENST00000442151 LSM1O15116 133 aaKnown RBP6.99□□□□□ -1.29
CD44-211ENST00000442151 ADAMDEC1O15204 470 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 CFLARO15519 480 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 EIF4E2O60573 245 aaKnown RBP6.99□□□□□ -1.29
CD44-211ENST00000442151 KCNK2O95069 426 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 BCKDHAP12694 445 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 SDC1P18827 310 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 TCEA1P23193 301 aaKnown RBP6.99□□□□□ -1.29
CD44-211ENST00000442151 MAP3K8P41279 467 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 ANXA11P50995 505 aaKnown RBP6.99□□□□□ -1.29
CD44-211ENST00000442151 ATP12AP54707 1039 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 SIRPAP78324 504 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 ADAM8P78325 824 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 TXNL4AP83876 142 aaKnown RBP6.99□□□□□ -1.29
CD44-211ENST00000442151 FAM27E3Q08E93 113 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 ARL13AQ5H913 290 aaPredicted RBP6.99□□□□□ -1.29
CD44-211ENST00000442151 ANXA8L1Q5VT79 327 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 HBMQ6B0K9 141 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 CLEC6AQ6EIG7 209 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 MFSD12Q6NUT3 480 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 EMBQ6PCB8 327 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 Q6ZSR9 355 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 PLEKHM3Q6ZWE6 761 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 C4orf33Q8N1A6 199 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 ZNF610Q8N9Z0 462 aa6.99□□□□□ -1.29
CD44-211ENST00000442151 PHOSPHO1Q8TCT1 267 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms