RNA–Protein interactions for RNA: ENST00000441402.5

TMEM39B-203, Transcript of transmembrane protein 39B, humanhuman

TSL 1 (best)

Gene TMEM39B, Length 1,538 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-203ENST00000441402 LPAR4Q99677 370 aa15.68■□□□□ 0.1
TMEM39B-203ENST00000441402 ULBP3Q9BZM4 244 aa15.68■□□□□ 0.1
TMEM39B-203ENST00000441402 CTPS2Q9NRF8 586 aa15.68■□□□□ 0.1
TMEM39B-203ENST00000441402 GPN3Q9UHW5 284 aaPredicted RBP15.68■□□□□ 0.1
TMEM39B-203ENST00000441402 SLC35A3Q9Y2D2 325 aa15.68■□□□□ 0.1
TMEM39B-203ENST00000441402 PCDHGA6Q9Y5G7 932 aa15.68■□□□□ 0.1
TMEM39B-203ENST00000441402 VPS13AQ96RL7 3174 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 LOC102723996A0A087X1L8 192 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 DPPA5A6NC42 116 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 FOXD2O60548 495 aaPredicted RBP15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 TSPAN2O60636 221 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 BCAS1O75363 584 aaPredicted RBP15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 SMNDC1O75940 238 aaKnown RBP eCLIP15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 CLPTM1O96005 669 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 NGFRP08138 427 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 GKN3PP0CG01 181 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 CYP4B1P13584 511 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 POU2F1P14859 743 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 GSTM3P21266 225 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 TGM1P22735 817 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 MMP11P24347 488 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 HTR2AP28223 471 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 CRISP1P54107 249 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 PNLIPRP2P54317 469 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 RNF4P78317 190 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 TARDBPQ13148 414 aaKnown RBP eCLIP15.67■□□□□ 0.12e-6■■■■□ 20.6
TMEM39B-203ENST00000441402 CDK5R2Q13319 367 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 FNDC7Q5VTL7 733 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 FAM198BQ6UWH4 519 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 RAB11FIP2Q7L804 512 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 PIP4P1Q86T03 277 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 ZNF440Q8IYI8 595 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 RNF113BQ8IZP6 322 aaKnown RBP15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 SLC34A3Q8N130 599 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 ZNF527Q8NB42 609 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 FAM71CQ8NEG0 241 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 NUBPLQ8TB37 319 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 MR1Q95460 341 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 ZNF566Q969W8 418 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 VMP1Q96GC9 406 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 PRSS27Q9BQR3 290 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 DDA1Q9BW61 102 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 TRIM2Q9C040 744 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 ZNF223Q9UK11 482 aaPredicted RBP15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 B3GALT1Q9Y5Z6 326 aa15.67■□□□□ 0.1
TMEM39B-203ENST00000441402 C9J4A7 227 aa15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 LYPD3O95274 346 aa15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 TFAP2AP05549 437 aa15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 CCDC159P0C7I6 412 aa15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 ELK4P28324 431 aa15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 ETV5P41161 510 aa15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 NR0B1P51843 470 aaKnown RBP15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 FOXL2P58012 376 aa15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 EIF3IQ13347 325 aaKnown RBP15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 MEP1AQ16819 746 aa15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 CTU2Q2VPK5 515 aaKnown RBP15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 LAIR2Q6ISS4 152 aa15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 PAPD4Q6PIY7 484 aaKnown RBP15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 RRM2BQ7LG56 351 aa15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 NKAIN4Q8IVV8 208 aa15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 GNPDA2Q8TDQ7 276 aa15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 PMEPA1Q969W9 287 aa15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 EFHD2Q96C19 240 aaPredicted RBP15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 LMF1Q96S06 567 aa15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 SPRY4Q9C004 299 aa15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 TMEM27Q9HBJ8 222 aa15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 PARD6AQ9NPB6 346 aa15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 TOR4AQ9NXH8 423 aa15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 NTNG1Q9Y2I2 539 aa15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 PCDHGA3Q9Y5H0 932 aa15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 KIF26BQ2KJY2 2108 aa15.66■□□□□ 0.1
TMEM39B-203ENST00000441402 A0A0C4DFX4 3053 aa15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 A0A087WXM4 84 aa15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 IGHV3-20A0A0C4DH32 117 aa15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 ZAR1LA6NP61 321 aa15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 KLF7O75840 302 aaPredicted RBP15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 MT-CO3P00414 261 aa15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 CSTAP01040 98 aa15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 TP53P04637 393 aaPredicted RBP15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 ITIH1P19827 911 aa15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 CHMP24386 653 aa15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 CRHBPP24387 322 aa15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 RPL5P46777 297 aaKnown RBP15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 OMPP47874 163 aa15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 GSSP48637 474 aa15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 HLCSP50747 726 aa15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 GTF2A1P52655 376 aaPredicted RBP15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 IL5RAQ01344 420 aa15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 TEKQ02763 1124 aa15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 MAD2L1BPQ15013 274 aaPredicted RBP15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 NCF4Q15080 339 aa15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 PTGES3Q15185 160 aaKnown RBP15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 FAM199XQ6PEV8 388 aaPredicted RBP15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 ISLR2Q6UXK2 745 aa15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 HSDL2Q6YN16 418 aa15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 ZNF730Q6ZMV8 503 aa15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 MBOAT2Q6ZWT7 520 aa15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 CCDC71Q8IV32 467 aaPredicted RBP15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 DEPDC4Q8N2C3 294 aa15.65■□□□□ 0.1
TMEM39B-203ENST00000441402 ZNF614Q8N883 585 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms