RNA–Protein interactions for RNA: ENST00000440289.6

PTPRJ-202, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 1 (best) BASIC

Gene PTPRJ, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-202ENST00000440289 CHST10O43529 356 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 PRKNO60260 465 aaPredicted RBP17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 HIST1H1TP22492 207 aaPredicted RBP17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 MPIP34949 423 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 CTNNB1P35222 781 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 ATP12AP54707 1039 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 SEC13P55735 322 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 DGCR2P98153 550 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 SF3A2Q15428 464 aaKnown RBP17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 FAM109AQ8N4B1 249 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 SLC25A18Q9H1K4 315 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 FN3KQ9H479 309 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 SYNPO2LQ9H987 977 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 ARID1AO14497 2285 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 IGKV1-8A0A0C4DH67 115 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 TRDV1A0A1B0GX56 115 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 A0A1W2PP55 124 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 PEX12O00623 359 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 SURF4O15260 269 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 MID1O15344 667 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 CDK3Q00526 305 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 RFLNBQ8N5W9 214 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 ZNF655Q8N720 491 aaPredicted RBP17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 OR5W2Q8NH69 310 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 UBQLN3Q9H347 655 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 DPEP2Q9H4A9 486 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 AP1M2Q9Y6Q5 423 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 TCF20Q9UGU0 1960 aaKnown RBP17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 POM121CA8CG34 1229 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 PAPLNO95428 1278 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 C1QBP02746 253 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 ACSL1P33121 698 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 OC90Q02509 493 aaPredicted RBP17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 WDR45BQ5MNZ6 344 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 LAMTOR1Q6IAA8 161 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 CNKSR3Q6P9H4 555 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 ERN2Q76MJ5 926 aaKnown RBP17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 RASGRP3Q8IV61 690 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 RAB42Q8N4Z0 105 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 GON7Q9BXV9 100 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 NARFLQ9H6Q4 476 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 CA5BQ9Y2D0 317 aa17.03■□□□□ 0.32
PTPRJ-202ENST00000440289 A0A1B0GVT2 93 aa17.02■□□□□ 0.32
PTPRJ-202ENST00000440289 LRRN3E7EW58 273 aa17.02■□□□□ 0.32
PTPRJ-202ENST00000440289 MAN2B1O00754 1011 aa17.02■□□□□ 0.32
PTPRJ-202ENST00000440289 P2RY2P41231 377 aa17.02■□□□□ 0.32
PTPRJ-202ENST00000440289 CLDN20P56880 219 aa17.02■□□□□ 0.32
PTPRJ-202ENST00000440289 BHLHB9Q6PI77 547 aa17.02■□□□□ 0.32
PTPRJ-202ENST00000440289 LINGO2Q7L985 606 aa17.02■□□□□ 0.32
PTPRJ-202ENST00000440289 LRRC20Q8TCA0 184 aa17.02■□□□□ 0.32
PTPRJ-202ENST00000440289 OSTF1Q92882 214 aa17.02■□□□□ 0.32
PTPRJ-202ENST00000440289 NKX3-1Q99801 234 aaPredicted RBP17.02■□□□□ 0.32
PTPRJ-202ENST00000440289 CACNG6Q9BXT2 260 aa17.02■□□□□ 0.32
PTPRJ-202ENST00000440289 ZBP1Q9H171 429 aa17.02■□□□□ 0.32
PTPRJ-202ENST00000440289 LRRN3Q9H3W5 708 aa17.02■□□□□ 0.32
PTPRJ-202ENST00000440289 CBLCQ9ULV8 474 aa17.02■□□□□ 0.32
PTPRJ-202ENST00000440289 EFCAB14O75071 495 aa17.02■□□□□ 0.31
PTPRJ-202ENST00000440289 MOSPD3O75425 235 aa17.02■□□□□ 0.31
PTPRJ-202ENST00000440289 SOX30O94993 753 aa17.02■□□□□ 0.31
PTPRJ-202ENST00000440289 GAS1P54826 345 aa17.02■□□□□ 0.31
PTPRJ-202ENST00000440289 CRYZQ08257 329 aaKnown RBP17.02■□□□□ 0.31
PTPRJ-202ENST00000440289 SLC35A4Q96G79 324 aa17.02■□□□□ 0.31
PTPRJ-202ENST00000440289 AUNIPQ9H7T9 357 aa17.02■□□□□ 0.31
PTPRJ-202ENST00000440289 NANSQ9NR45 359 aa17.02■□□□□ 0.31
PTPRJ-202ENST00000440289 NLGN3Q9NZ94 848 aa17.02■□□□□ 0.31
PTPRJ-202ENST00000440289 OR6C2Q9NZP2 312 aa17.02■□□□□ 0.31
PTPRJ-202ENST00000440289 TMEM5Q9Y2B1 443 aa17.02■□□□□ 0.31
PTPRJ-202ENST00000440289 NUPL2O15504 423 aaKnown RBP17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 RGS9O75916 674 aaPredicted RBP17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 PPP1R3DO95685 299 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 RPN2P04844 631 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 ZNF250P15622 560 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 TEAD1P28347 426 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 MAPK9P45984 424 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 OMPP47874 163 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 ZMYND11Q15326 602 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 WDR34Q96EX3 536 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 SERGEFQ9UGK8 458 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 CACNG2Q9Y698 323 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 TSPAN4O14817 238 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 LAMP2P13473 410 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 STOMP27105 288 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 TRMT12Q53H54 448 aaKnown RBP17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 HES5Q5TA89 166 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 PXDC1Q5TGL8 231 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 SFXN4Q6P4A7 337 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 SLC39A5Q6ZMH5 540 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 SIAH3Q8IW03 269 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 OR11H4Q8NGC9 324 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 OR52E1Q8NGJ3 308 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 OR6K6Q8NGW6 343 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 ZNF514Q96K75 400 aaPredicted RBP17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 PTCHD1Q96NR3 888 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 OR10A4Q9H209 315 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 WDR26Q9H7D7 661 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 BABAM2Q9NXR7 383 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 PRKAG2Q9UGJ0 569 aa17.01■□□□□ 0.31
PTPRJ-202ENST00000440289 CDH10Q9Y6N8 788 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms