RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 TNNI3P19429 210 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 DRD5P21918 477 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 GDF1P27539 372 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 MDH2P40926 338 aaKnown RBP2.62□□□□□ -1.99
VPS41-207ENST00000439468 ACAA2P42765 397 aaKnown RBP2.62□□□□□ -1.99
VPS41-207ENST00000439468 KRT6CP48668 564 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 SLC25A1P53007 311 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 RPL8P62917 257 aaKnown RBP2.62□□□□□ -1.99
VPS41-207ENST00000439468 RGS1Q08116 209 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 SNTB2Q13425 540 aaKnown RBP2.62□□□□□ -1.99
VPS41-207ENST00000439468 ASAH1Q13510 395 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 SERTAD2Q14140 314 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 TGIF1Q15583 401 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 CYP51A1Q16850 503 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 CCDC57Q2TAC2 916 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 CYBRD1Q53TN4 286 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 PAN3Q58A45 887 aaKnown RBP2.62□□□□□ -1.99
VPS41-207ENST00000439468 TMEM41BQ5BJD5 291 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 RNLSQ5VYX0 342 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 UFSP1Q6NVU6 142 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 LRRC8BQ6P9F7 803 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 CES3Q6UWW8 571 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 DPY19L4Q7Z388 723 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 KIAA1328Q86T90 577 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 ERICH1Q86X53 443 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 ZNF584Q8IVC4 421 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 GPR65Q8IYL9 337 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 CSNK1A1LQ8N752 337 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 OR5AU1Q8NGC0 362 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 CCDC26Q8TAB7 109 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 ZPLD1Q8TCW7 415 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 RPL3LQ92901 407 aaKnown RBP2.62□□□□□ -1.99
VPS41-207ENST00000439468 SYAP1Q96A49 352 aaPredicted RBP2.62□□□□□ -1.99
VPS41-207ENST00000439468 RAB7BQ96AH8 199 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 VSIG2Q96IQ7 327 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 NOL4LQ96MY1 436 aaPredicted RBP2.62□□□□□ -1.99
VPS41-207ENST00000439468 EXOSC3Q9NQT5 275 aaKnown RBP2.62□□□□□ -1.99
VPS41-207ENST00000439468 ABCD2Q9UBJ2 740 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 ANAPC7Q9UJX3 599 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 GMPPBQ9Y5P6 360 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 CDK12Q9NYV4 1490 aaPredicted RBP2.62□□□□□ -1.99
VPS41-207ENST00000439468 CHD4Q14839 1912 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 BCL9LQ86UU0 1499 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 IGHV3-35A0A0C4DH35 117 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 CDX4O14627 284 aaPredicted RBP2.61□□□□□ -1.99
VPS41-207ENST00000439468 MAPK13O15264 365 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 GPAA1O43292 621 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 SCRG1O75711 98 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 UFL1O94874 794 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 F10P00742 488 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 CSF2P04141 144 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 DNAH10OSP0CZ25 163 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 ATP6V1C1P21283 382 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 CA8P35219 290 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 FNTAP49354 379 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 OSTNP61366 133 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 NTHL1P78549 312 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 EWSR1Q01844 656 aaKnown RBP eCLIP2.61□□□□□ -1.99
VPS41-207ENST00000439468 PJVKQ0ZLH3 352 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 KCNJ11Q14654 390 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 RIPPLY2Q5TAB7 128 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 MARC1Q5VT66 337 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 MEDAGQ5VYS4 303 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 BLOC1S2Q6QNY1 142 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 VITQ6UXI7 678 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 C11orf53Q8IXP5 236 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 C9orf40Q8IXQ3 194 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 TEX9Q8N6V9 391 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 OR9A4Q8NGU2 314 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 AKR1E2Q96JD6 320 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 TPPP3Q9BW30 176 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 ELOVL4Q9GZR5 314 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 TMEM117Q9H0C3 514 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 OPN3Q9H1Y3 402 aaPredicted RBP2.61□□□□□ -1.99
VPS41-207ENST00000439468 PAK1IP1Q9NWT1 392 aaPredicted RBP2.61□□□□□ -1.99
VPS41-207ENST00000439468 SMC3Q9UQE7 1217 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 L3MBTL1Q9Y468 752 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 ATP6V0A2Q9Y487 856 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 CPS1P31327 1500 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 KDM5BQ9UGL1 1544 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 SF3B1O75533 1304 aaKnown RBP eCLIP2.61□□□□□ -1.99
VPS41-207ENST00000439468 VWDEQ8N2E2 1590 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 CARMIL1Q5VZK9 1371 aa2.61□□□□□ -1.99
VPS41-207ENST00000439468 LRP6O75581 1613 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 RGS12O14924 1447 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 ATP10DQ9P241 1426 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 UHRF1BP1LA0JNW5 1464 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 A0A1B0GWJ7 208 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 E9PLD3 99 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 RAMP1O60894 148 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 ZNF254O75437 659 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 ANP32DO95626 131 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 UQCRC2P22695 453 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 IGHV1-2P23083 117 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 KIF5BP33176 963 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 SOX6P35712 828 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 XCR1P46094 333 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 RPL34P49207 117 aaKnown RBP2.6□□□□□ -1.99
VPS41-207ENST00000439468 EMDP50402 254 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms