RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 NFATC4Q14934 902 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 SGCAQ16586 387 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 SLC24A5Q71RS6 500 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 FAM185AQ8N0U4 392 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 KDM8Q8N371 416 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 TMEM18Q96B42 140 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 RAB3CQ96E17 227 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 MTHFD2LQ9H903 347 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-209ENST00000437951 RYDENQ9NUL5 291 aaKnown RBP10.92□□□□□ -0.66
PTCH1-209ENST00000437951 TCRBV7S3A2A0A539 114 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 INTS5Q6P9B9 1019 aaKnown RBP10.92□□□□□ -0.66
PTCH1-209ENST00000437951 ENPP6Q6UWR7 440 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 SYT13Q7L8C5 426 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 HPSE2Q8WWQ2 592 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 FAM46AQ96IP4 442 aaKnown RBP10.92□□□□□ -0.66
PTCH1-209ENST00000437951 C12orf57Q99622 126 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 SLIT3O75094 1523 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 K7EQM0 130 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 CCL16O15467 120 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 FOXD2O60548 495 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-209ENST00000437951 DDNO94850 711 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-209ENST00000437951 EOMESO95936 686 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 STAG3L2P0CL84 134 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 PAX6P26367 422 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 ECH1Q13011 328 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 NKPD1Q17RQ9 610 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 PIM3Q86V86 326 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 ESAMQ96AP7 390 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 SYNPO2LQ9H987 977 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 ASCC3Q8N3C0 2202 aaKnown RBP10.92□□□□□ -0.66
PTCH1-209ENST00000437951 GRXCR1A8MXD5 290 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 KDELR3O43731 214 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 MGST1P10620 155 aaKnown RBP10.92□□□□□ -0.66
PTCH1-209ENST00000437951 CTSOP43234 321 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-209ENST00000437951 HSD17B7P56937 341 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 LCN6P62502 163 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 PDGFRLQ15198 375 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 TTLL10Q6ZVT0 673 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 LSMEM2Q8N112 164 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 ZNF561Q8N587 486 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 DEFB118Q96PH6 123 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 BCAS3Q9H6U6 928 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 EXOSC3Q9NQT5 275 aaKnown RBP10.92□□□□□ -0.66
PTCH1-209ENST00000437951 GAR1Q9NY12 217 aaKnown RBP10.92□□□□□ -0.66
PTCH1-209ENST00000437951 SPHK1Q9NYA1 384 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 SERTAD3Q9UJW9 196 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 E7ESA3 106 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 MT-ND4P03905 459 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 KLRK1P26718 216 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 RAB7AP51149 207 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 ZNF92Q03936 586 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 OR1M1Q8NGA1 313 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 OR4K15Q8NH41 348 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 TMEM88BA6NKF7 163 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 H3BSH0 61 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 MPPED1O15442 326 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 EPHA1P21709 976 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 GABRB3P28472 473 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 SSTR2P30874 369 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 MC3RP41968 323 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 ARHGAP40Q5TG30 622 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 SDHAF4Q5VUM1 108 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 SIGLECL1Q8N7X8 197 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 NETO2Q8NC67 525 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 LPPQ93052 612 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 IL37Q9NZH6 218 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 PIK3C2BO00750 1634 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 SLC38A8A6NNN8 435 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 TMEM225BP0DP42 221 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 DTYMKP23919 212 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 SLC6A8P48029 635 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 SGSHP51688 502 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 PLBD1Q6P4A8 553 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 LEG1Q6P5S2 330 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 TPRG1Q6ZUI0 275 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 NAXEQ8NCW5 288 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 OR10Q1Q8NGQ4 319 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 PIGVQ9NUD9 493 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 SLC39A9Q9NUM3 307 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 DMAC2Q9NW81 257 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 PURGQ9UJV8 347 aaKnown RBP10.91□□□□□ -0.66
PTCH1-209ENST00000437951 B4GALT5O43286 388 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 UGDHO60701 494 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 PMS2P2O95744 297 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 CD1DP15813 335 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 LILRA4P59901 499 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 TCTE1Q5JU00 501 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 VARS2Q5ST30 1063 aaKnown RBP10.91□□□□□ -0.66
PTCH1-209ENST00000437951 TMEM244Q5VVB8 128 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 MFSD6LQ8IWD5 586 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 LRRC56Q8IYG6 542 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-209ENST00000437951 KDF1Q8NAX2 398 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-209ENST00000437951 TEPSINQ96N21 525 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 SLC29A1Q99808 456 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 GLIS2Q9BZE0 524 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-209ENST00000437951 SMOC2Q9H3U7 446 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 UPK3BL1B0FP48 263 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 UPK3BL2E5RIL1 263 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 ZNF623O75123 536 aa10.91□□□□□ -0.66
PTCH1-209ENST00000437951 TRAPPC6AO75865 159 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms