RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 CHRM4P08173 479 aa17.13■□□□□ 0.33
RPUSD3-207ENST00000433555 GLI4P10075 376 aa17.13■□□□□ 0.33
RPUSD3-207ENST00000433555 NCF2P19878 526 aaPredicted RBP17.13■□□□□ 0.33
RPUSD3-207ENST00000433555 LHX2P50458 406 aa17.13■□□□□ 0.33
RPUSD3-207ENST00000433555 ATP12AP54707 1039 aa17.13■□□□□ 0.33
RPUSD3-207ENST00000433555 MAPK14Q16539 360 aa17.13■□□□□ 0.33
RPUSD3-207ENST00000433555 ACSF3Q4G176 576 aaPredicted RBP17.13■□□□□ 0.33
RPUSD3-207ENST00000433555 PDZK1Q5T2W1 519 aa17.13■□□□□ 0.33
RPUSD3-207ENST00000433555 MTFR2Q6P444 385 aa17.13■□□□□ 0.33
RPUSD3-207ENST00000433555 CBLN3Q6UW01 205 aa17.13■□□□□ 0.33
RPUSD3-207ENST00000433555 RPTNQ6XPR3 784 aa17.13■□□□□ 0.33
RPUSD3-207ENST00000433555 ZNF808Q8N4W9 903 aaPredicted RBP17.13■□□□□ 0.33
RPUSD3-207ENST00000433555 ZNF614Q8N883 585 aa17.13■□□□□ 0.33
RPUSD3-207ENST00000433555 ZNF524Q96C55 264 aa17.13■□□□□ 0.33
RPUSD3-207ENST00000433555 ZNF317Q96PQ6 595 aaPredicted RBP17.13■□□□□ 0.33
RPUSD3-207ENST00000433555 NMUR2Q9GZQ4 415 aa17.13■□□□□ 0.33
RPUSD3-207ENST00000433555 QRSL1Q9H0R6 528 aaKnown RBP17.13■□□□□ 0.33
RPUSD3-207ENST00000433555 RUBCNLQ9H714 662 aa17.13■□□□□ 0.33
RPUSD3-207ENST00000433555 EXD2Q9NVH0 621 aa17.13■□□□□ 0.33
RPUSD3-207ENST00000433555 ALKBH4Q9NXW9 302 aa17.13■□□□□ 0.33
RPUSD3-207ENST00000433555 CAMK2AQ9UQM7 478 aa17.13■□□□□ 0.33
RPUSD3-207ENST00000433555 MRPS18CQ9Y3D5 142 aaKnown RBP17.13■□□□□ 0.33
RPUSD3-207ENST00000433555 PCDHB14Q9Y5E9 798 aa17.13■□□□□ 0.33
RPUSD3-207ENST00000433555 A0A096LPI6 279 aa17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 TRBV5-3A0A0A0MS03 114 aa17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 BCAS1O75363 584 aaPredicted RBP17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 STX11O75558 287 aa17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 UGT2B17O75795 530 aa17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 ANP32DO95626 131 aa17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 ACTL6AO96019 429 aa17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 TROVE2P10155 538 aaKnown RBP eCLIP17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 ETFAP13804 333 aa17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 COL8A1P27658 744 aa17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 ADH7P40394 386 aa17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 CLDN18P56856 261 aa17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 PLAURQ03405 335 aa17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 GANABQ14697 944 aaKnown RBP17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 ZNF141Q15928 474 aa17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 SYPL1Q16563 259 aa17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 TMEM44Q2T9K0 475 aa17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 RAET1LQ5VY80 246 aa17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 PLXDC2Q6UX71 529 aa17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 MAMDC2Q7Z304 686 aaPredicted RBP17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 C10orf111Q8N326 155 aa17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 PHOSPHO1Q8TCT1 267 aa17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 TTYH2Q9BSA4 534 aa17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 TPT1P8Q9HAU6 139 aa17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 VDAC3Q9Y277 283 aa17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 WDR45Q9Y484 360 aa17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 DTNAQ9Y4J8 743 aa17.12■□□□□ 0.33
RPUSD3-207ENST00000433555 HCRTR2O43614 444 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 SOX30O94993 753 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 H6PDO95479 791 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 KRT75O95678 551 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 AGR2O95994 175 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 HPGDP15428 266 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 ZNF708P17019 499 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 GRNP28799 593 aaKnown RBP17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 CHRNEQ04844 493 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 PMPCAQ10713 525 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 PLPPR5Q32ZL2 321 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 LRIF1Q5T3J3 769 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 ATAD3BQ5T9A4 648 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 B3GNT6Q6ZMB0 384 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 LSRQ86X29 649 aaPredicted RBP17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 CCDC71Q8IV32 467 aaPredicted RBP17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 MISPQ8IVT2 679 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 ZNF527Q8NB42 609 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 B4GALNT2Q8NHY0 566 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 C10orf82Q8WW14 230 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 HOXD1Q9GZZ0 328 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 SAP130Q9H0E3 1048 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 SLC38A1Q9H2H9 487 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 IKZF5Q9H5V7 419 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 PTGES2Q9H7Z7 377 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 MED17Q9NVC6 651 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 ICAM5Q9UMF0 924 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 RNF6Q9Y252 685 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 CARD8Q9Y2G2 431 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 L3MBTL1Q9Y468 752 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 HCFC1P51610 2035 aa17.11■□□□□ 0.33
RPUSD3-207ENST00000433555 A0A0G2JNJ9 132 aa17.1■□□□□ 0.33
RPUSD3-207ENST00000433555 OR2M5A3KFT3 312 aa17.1■□□□□ 0.33
RPUSD3-207ENST00000433555 H0YC42 278 aa17.1■□□□□ 0.33
RPUSD3-207ENST00000433555 TOXO94900 526 aa17.1■□□□□ 0.33
RPUSD3-207ENST00000433555 NUDT7P0C024 238 aa17.1■□□□□ 0.33
RPUSD3-207ENST00000433555 ARFIP2P53365 341 aa17.1■□□□□ 0.33
RPUSD3-207ENST00000433555 TPD52P55327 224 aaPredicted RBP17.1■□□□□ 0.33
RPUSD3-207ENST00000433555 CLDN15P56746 228 aa17.1■□□□□ 0.33
RPUSD3-207ENST00000433555 IRX1P78414 480 aaPredicted RBP17.1■□□□□ 0.33
RPUSD3-207ENST00000433555 SRYQ05066 204 aa17.1■□□□□ 0.33
RPUSD3-207ENST00000433555 ZNF630Q2M218 657 aaPredicted RBP17.1■□□□□ 0.33
RPUSD3-207ENST00000433555 GPAT3Q53EU6 434 aa17.1■□□□□ 0.33
RPUSD3-207ENST00000433555 RETREG3Q86VR2 466 aa17.1■□□□□ 0.33
RPUSD3-207ENST00000433555 EID3Q8N140 333 aa17.1■□□□□ 0.33
RPUSD3-207ENST00000433555 ZNF619Q8N2I2 560 aa17.1■□□□□ 0.33
RPUSD3-207ENST00000433555 NAXEQ8NCW5 288 aa17.1■□□□□ 0.33
RPUSD3-207ENST00000433555 POC1BQ8TC44 478 aa17.1■□□□□ 0.33
RPUSD3-207ENST00000433555 SDCCAG3Q96C92 435 aa17.1■□□□□ 0.33
RPUSD3-207ENST00000433555 ZG16BQ96DA0 208 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms