RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 OR10A6Q8NH74 314 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 MS4A3Q96HJ5 214 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 POLE3Q9NRF9 147 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 CALML5Q9NZT1 146 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 ZNF232Q9UNY5 417 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 SLC6A5Q9Y345 797 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 NBASA2RRP1 2371 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 TRBV5-3A0A0A0MS03 114 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 CENPVL1A0A0U1RR11 272 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 SERINC4A6NH21 518 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 KIAA0513O60268 411 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 TPOP07202 933 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 NGFRP08138 427 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 UBTFL6P0CB48 400 aaPredicted RBP13.25□□□□□ -0.29
SGCE-204ENST00000428696 HK1P19367 917 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 SLC6A2P23975 617 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 TDGF1P3P51864 188 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 CASP6P55212 293 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 MXRA7P84157 204 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 CDK6Q00534 326 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 ZNF630Q2M218 657 aaPredicted RBP13.25□□□□□ -0.29
SGCE-204ENST00000428696 HYAL4Q2M3T9 481 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 COQ5Q5HYK3 327 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 ARHGAP11AQ6P4F7 1023 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 FRRS1Q6ZNA5 592 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 EIF3MQ7L2H7 374 aaKnown RBP13.25□□□□□ -0.29
SGCE-204ENST00000428696 SPPL2CQ8IUH8 684 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 MISPQ8IVT2 679 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 C10orf111Q8N326 155 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 OR5M1Q8NGP8 315 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 B4GALNT2Q8NHY0 566 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 DTNBP1Q96EV8 351 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 TREX2Q9BQ50 279 aaPredicted RBP13.25□□□□□ -0.29
SGCE-204ENST00000428696 SLC38A1Q9H2H9 487 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 RUBCNLQ9H714 662 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 ZDHHC11Q9H8X9 412 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 A4GALTQ9NPC4 353 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 VDAC3Q9Y277 283 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 L3MBTL1Q9Y468 752 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 SVILO95425 2214 aa13.25□□□□□ -0.29
SGCE-204ENST00000428696 SPENQ96T58 3664 aaKnown RBP13.25□□□□□ -0.29
SGCE-204ENST00000428696 A0A0G2JPF8 293 aa13.24□□□□□ -0.29
SGCE-204ENST00000428696 CLDN24A6NM45 220 aa13.24□□□□□ -0.29
SGCE-204ENST00000428696 HNRNPCL2B2RXH8 293 aa13.24□□□□□ -0.29
SGCE-204ENST00000428696 HNRNPCL3B7ZW38 293 aa13.24□□□□□ -0.29
SGCE-204ENST00000428696 OIP5O43482 229 aa13.24□□□□□ -0.29
SGCE-204ENST00000428696 SLC19A2O60779 497 aa13.24□□□□□ -0.29
SGCE-204ENST00000428696 HNRNPCL1O60812 293 aaKnown RBP13.24□□□□□ -0.29
SGCE-204ENST00000428696 NPPAP01160 153 aa13.24□□□□□ -0.29
SGCE-204ENST00000428696 HNRNPCL4P0DMR1 293 aa13.24□□□□□ -0.29
SGCE-204ENST00000428696 UBL4AP11441 157 aa13.24□□□□□ -0.29
SGCE-204ENST00000428696 GPX2P18283 190 aa13.24□□□□□ -0.29
SGCE-204ENST00000428696 RYKP34925 604 aa13.24□□□□□ -0.29
SGCE-204ENST00000428696 ZNF41P51814 821 aaPredicted RBP13.24□□□□□ -0.29
SGCE-204ENST00000428696 DSCR4P56555 118 aaPredicted RBP13.24□□□□□ -0.29
SGCE-204ENST00000428696 SCARB2Q14108 478 aa13.24□□□□□ -0.29
SGCE-204ENST00000428696 ZNF141Q15928 474 aa13.24□□□□□ -0.29
SGCE-204ENST00000428696 RAET1LQ5VY80 246 aa13.24□□□□□ -0.29
SGCE-204ENST00000428696 ZNF585AQ6P3V2 769 aa13.24□□□□□ -0.29
SGCE-204ENST00000428696 C3P1Q6ZMU1 363 aa13.24□□□□□ -0.29
SGCE-204ENST00000428696 TRILQ7L0X0 811 aa13.24□□□□□ -0.29
SGCE-204ENST00000428696 IFNEQ86WN2 208 aa13.24□□□□□ -0.29
SGCE-204ENST00000428696 OR52P1PQ8NH57 321 aa13.24□□□□□ -0.29
SGCE-204ENST00000428696 ARSGQ96EG1 525 aa13.24□□□□□ -0.29
SGCE-204ENST00000428696 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.24□□□□□ -0.29
SGCE-204ENST00000428696 ARL8BQ9NVJ2 186 aa13.24□□□□□ -0.29
SGCE-204ENST00000428696 QPCTLQ9NXS2 382 aa13.24□□□□□ -0.29
SGCE-204ENST00000428696 KCNE5Q9UJ90 142 aa13.24□□□□□ -0.29
SGCE-204ENST00000428696 A0A1W2PQD3 144 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 AGAP5A6NIR3 686 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 SHISA8B8ZZ34 492 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 PRRG2O14669 202 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 ZNF264O43296 627 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 WISP1O95388 367 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 PGM3O95394 542 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 DBIP07108 87 aaKnown RBP13.23□□□□□ -0.29
SGCE-204ENST00000428696 MSX1P28360 303 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 KCNJ10P78508 379 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 ZNF117Q03924 483 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 SRYQ05066 204 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 C1QL3Q5VWW1 255 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 REEP3Q6NUK4 255 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 CBLN3Q6UW01 205 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 ARSKQ6UWY0 536 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 MTERF4Q7Z6M4 381 aaKnown RBP13.23□□□□□ -0.29
SGCE-204ENST00000428696 VRK2Q86Y07 508 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 NEIL3Q8TAT5 605 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 RNF138Q8WVD3 245 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 WDR60Q8WVS4 1066 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 RELTQ969Z4 430 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 SFXN2Q96NB2 322 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 SAP130Q9H0E3 1048 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 UBQLN3Q9H347 655 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 HHATLQ9HCP6 504 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 ACKR4Q9NPB9 350 aa13.23□□□□□ -0.29
SGCE-204ENST00000428696 CCT8L1PA6NM43 557 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 NPIPB9F8W1W9 429 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 SUSD5O60279 629 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 ZIC3O60481 467 aa13.22□□□□□ -0.29
SGCE-204ENST00000428696 HCN1O60741 890 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms