RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 CDC42EP4Q9H3Q1 356 aaKnown RBP16.3■□□□□ 0.2
UPK3BP1-201ENST00000428678 ALG2Q9H553 416 aa16.3■□□□□ 0.2
UPK3BP1-201ENST00000428678 MYNNQ9NPC7 610 aa16.3■□□□□ 0.2
UPK3BP1-201ENST00000428678 SIRT5Q9NXA8 310 aa16.3■□□□□ 0.2
UPK3BP1-201ENST00000428678 TAS2R7Q9NYW3 318 aa16.3■□□□□ 0.2
UPK3BP1-201ENST00000428678 FESP07332 822 aa16.29■□□□□ 0.2
UPK3BP1-201ENST00000428678 PABPC4LP0CB38 370 aaKnown RBP16.29■□□□□ 0.2
UPK3BP1-201ENST00000428678 PSMA4P25789 261 aaKnown RBP16.29■□□□□ 0.2
UPK3BP1-201ENST00000428678 ADH6P28332 368 aa16.29■□□□□ 0.2
UPK3BP1-201ENST00000428678 SFTPDP35247 375 aa16.29■□□□□ 0.2
UPK3BP1-201ENST00000428678 PKNOX1P55347 436 aa16.29■□□□□ 0.2
UPK3BP1-201ENST00000428678 BSPH1Q075Z2 132 aa16.29■□□□□ 0.2
UPK3BP1-201ENST00000428678 HSPB3Q12988 150 aa16.29■□□□□ 0.2
UPK3BP1-201ENST00000428678 SLC29A2Q14542 456 aa16.29■□□□□ 0.2
UPK3BP1-201ENST00000428678 ZNF239Q16600 458 aaKnown RBP16.29■□□□□ 0.2
UPK3BP1-201ENST00000428678 IMPG1Q17R60 797 aa16.29■□□□□ 0.2
UPK3BP1-201ENST00000428678 SFRP5Q5T4F7 317 aa16.29■□□□□ 0.2
UPK3BP1-201ENST00000428678 C8orf74Q6P047 294 aa16.29■□□□□ 0.2
UPK3BP1-201ENST00000428678 ZNF551Q7Z340 670 aaPredicted RBP16.29■□□□□ 0.2
UPK3BP1-201ENST00000428678 NUFIP2Q7Z417 695 aaKnown RBP16.29■□□□□ 0.2
UPK3BP1-201ENST00000428678 HSD17B8Q92506 261 aa16.29■□□□□ 0.2
UPK3BP1-201ENST00000428678 KISS1RQ969F8 398 aaPredicted RBP16.29■□□□□ 0.2
UPK3BP1-201ENST00000428678 KLHL15Q96M94 604 aa16.29■□□□□ 0.2
UPK3BP1-201ENST00000428678 LRTM1Q9HBL6 345 aa16.29■□□□□ 0.2
UPK3BP1-201ENST00000428678 BARX1Q9HBU1 254 aaPredicted RBP16.29■□□□□ 0.2
UPK3BP1-201ENST00000428678 ZNF180Q9UJW8 692 aa16.29■□□□□ 0.2
UPK3BP1-201ENST00000428678 GDF2Q9UK05 429 aaPredicted RBP16.29■□□□□ 0.2
UPK3BP1-201ENST00000428678 POLR3HQ9Y535 204 aaPredicted RBP16.29■□□□□ 0.2
UPK3BP1-201ENST00000428678 PHF1O43189 567 aaPredicted RBP16.28■□□□□ 0.2
UPK3BP1-201ENST00000428678 PRPS2P11908 318 aa16.28■□□□□ 0.2
UPK3BP1-201ENST00000428678 HPGDP15428 266 aa16.28■□□□□ 0.2
UPK3BP1-201ENST00000428678 IMPDH1P20839 514 aa16.28■□□□□ 0.2
UPK3BP1-201ENST00000428678 ATP5F1P24539 256 aaPredicted RBP16.28■□□□□ 0.2
UPK3BP1-201ENST00000428678 CASQ1P31415 396 aa16.28■□□□□ 0.2
UPK3BP1-201ENST00000428678 GPC1P35052 558 aa16.28■□□□□ 0.2
UPK3BP1-201ENST00000428678 PRKAG1P54619 331 aa16.28■□□□□ 0.2
UPK3BP1-201ENST00000428678 PGGHGQ32M88 737 aa16.28■□□□□ 0.2
UPK3BP1-201ENST00000428678 VPS26BQ4G0F5 336 aa16.28■□□□□ 0.2
UPK3BP1-201ENST00000428678 GLE1Q53GS7 698 aaKnown RBP16.28■□□□□ 0.2
UPK3BP1-201ENST00000428678 SZRD1Q7Z422 152 aa16.28■□□□□ 0.2
UPK3BP1-201ENST00000428678 TRABD2AQ86V40 505 aa16.28■□□□□ 0.2
UPK3BP1-201ENST00000428678 LILRA2Q8N149 483 aa16.28■□□□□ 0.2
UPK3BP1-201ENST00000428678 BANPQ8N9N5 519 aa16.28■□□□□ 0.2
UPK3BP1-201ENST00000428678 FBXO30Q8TB52 745 aa16.28■□□□□ 0.2
UPK3BP1-201ENST00000428678 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.28■□□□□ 0.2
UPK3BP1-201ENST00000428678 POC1BQ8TC44 478 aa16.28■□□□□ 0.2
UPK3BP1-201ENST00000428678 ACTRT2Q8TDY3 377 aa16.28■□□□□ 0.2
UPK3BP1-201ENST00000428678 RNF128Q8TEB7 428 aa16.28■□□□□ 0.2
UPK3BP1-201ENST00000428678 KLHDC3Q9BQ90 382 aa16.28■□□□□ 0.2
UPK3BP1-201ENST00000428678 TIGARQ9NQ88 270 aa16.28■□□□□ 0.2
UPK3BP1-201ENST00000428678 TMEM216Q9P0N5 145 aa16.28■□□□□ 0.2
UPK3BP1-201ENST00000428678 KLHL13Q9P2N7 655 aa16.28■□□□□ 0.2
UPK3BP1-201ENST00000428678 NKX2-2O95096 273 aa16.27■□□□□ 0.2
UPK3BP1-201ENST00000428678 ADAP00813 363 aa16.27■□□□□ 0.2
UPK3BP1-201ENST00000428678 NGFRP08138 427 aa16.27■□□□□ 0.2
UPK3BP1-201ENST00000428678 SNRPAP09012 282 aaKnown RBP16.27■□□□□ 0.2
UPK3BP1-201ENST00000428678 SHC1P29353 583 aa16.27■□□□□ 0.2
UPK3BP1-201ENST00000428678 RNPS1Q15287 305 aaKnown RBP16.27■□□□□ 0.2
UPK3BP1-201ENST00000428678 DNM1P46Q6ZS02 220 aa16.27■□□□□ 0.2
UPK3BP1-201ENST00000428678 RELL1Q8IUW5 271 aa16.27■□□□□ 0.2
UPK3BP1-201ENST00000428678 TUSC5Q8IXB3 177 aa16.27■□□□□ 0.2
UPK3BP1-201ENST00000428678 PIWIL2Q8TC59 973 aaKnown RBP16.27■□□□□ 0.2
UPK3BP1-201ENST00000428678 RHNO1Q9BSD3 238 aa16.27■□□□□ 0.2
UPK3BP1-201ENST00000428678 TRAF4Q9BUZ4 470 aaPredicted RBP16.27■□□□□ 0.2
UPK3BP1-201ENST00000428678 SRXN1Q9BYN0 137 aa16.27■□□□□ 0.2
UPK3BP1-201ENST00000428678 POTEKPQ9BYX7 375 aa16.27■□□□□ 0.2
UPK3BP1-201ENST00000428678 TRIM2Q9C040 744 aa16.27■□□□□ 0.2
UPK3BP1-201ENST00000428678 GRPEL1Q9HAV7 217 aa16.27■□□□□ 0.2
UPK3BP1-201ENST00000428678 MID1IP1Q9NPA3 183 aa16.27■□□□□ 0.2
UPK3BP1-201ENST00000428678 SERTM1A2A2V5 107 aa16.26■□□□□ 0.19
UPK3BP1-201ENST00000428678 DPRXA6NFQ7 191 aa16.26■□□□□ 0.19
UPK3BP1-201ENST00000428678 SSX4O60224 188 aa16.26■□□□□ 0.19
UPK3BP1-201ENST00000428678 CD8AP01732 235 aa16.26■□□□□ 0.19
UPK3BP1-201ENST00000428678 THBS1P07996 1170 aa16.26■□□□□ 0.19
UPK3BP1-201ENST00000428678 IFI6P09912 130 aa16.26■□□□□ 0.19
UPK3BP1-201ENST00000428678 PRKAA2P54646 552 aa16.26■□□□□ 0.19
UPK3BP1-201ENST00000428678 FOXA1P55317 472 aa16.26■□□□□ 0.19
UPK3BP1-201ENST00000428678 P2RY6Q15077 328 aa16.26■□□□□ 0.19
UPK3BP1-201ENST00000428678 DNAJC14Q6Y2X3 702 aaPredicted RBP16.26■□□□□ 0.19
UPK3BP1-201ENST00000428678 IKBIPQ70UQ0 350 aa16.26■□□□□ 0.19
UPK3BP1-201ENST00000428678 BHLHA15Q7RTS1 189 aaPredicted RBP16.26■□□□□ 0.19
UPK3BP1-201ENST00000428678 ZAR1Q86SH2 424 aa16.26■□□□□ 0.19
UPK3BP1-201ENST00000428678 SLC22A9Q8IVM8 553 aa16.26■□□□□ 0.19
UPK3BP1-201ENST00000428678 MISPQ8IVT2 679 aa16.26■□□□□ 0.19
UPK3BP1-201ENST00000428678 CDRT4Q8N9R6 151 aa16.26■□□□□ 0.19
UPK3BP1-201ENST00000428678 B4GALNT2Q8NHY0 566 aa16.26■□□□□ 0.19
UPK3BP1-201ENST00000428678 CPNE4Q96A23 557 aaPredicted RBP16.26■□□□□ 0.19
UPK3BP1-201ENST00000428678 FAIMQ9NVQ4 179 aa16.26■□□□□ 0.19
UPK3BP1-201ENST00000428678 CISD1Q9NZ45 108 aaKnown RBP16.26■□□□□ 0.19
UPK3BP1-201ENST00000428678 WBP11Q9Y2W2 641 aaKnown RBP16.26■□□□□ 0.19
UPK3BP1-201ENST00000428678 ANK2Q01484 3957 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 IGHV4-30-2A0A087WSY4 118 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 SCDO00767 359 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 PDPK1O15530 556 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 GPRIN2O60269 458 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 KCNK2O95069 426 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 FAM157CP0CG43 387 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 ACP2P11117 423 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 MAP3K8P41279 467 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 EIF1P41567 113 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms