RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 C17orf67Q0P5P2 114 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 MPP2Q14168 576 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 SMU1Q2TAY7 513 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 PGS1Q32NB8 556 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 CCNJQ5T5M9 372 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 P4HA3Q7Z4N8 544 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 GRAMD2AQ8IUY3 354 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 P3H2Q8IVL5 708 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 MEIOBQ8N635 442 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 C9orf106Q8NAJ2 232 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 GATSQ8NAP1 163 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 OR5AK3PQ8NH89 298 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 ADAMTS15Q8TE58 950 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 SMPDL3BQ92485 455 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 HOXB13Q92826 284 aaPredicted RBP11.49□□□□□ -0.57
SGCE-203ENST00000425444 TM9SF2Q99805 663 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 G6PC3Q9BUM1 346 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 NUF2Q9BZD4 464 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 RTN4RQ9BZR6 473 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 C20orf27Q9GZN8 174 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 CXorf36Q9H7Y0 433 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 ASIC5Q9NY37 505 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.49□□□□□ -0.57
SGCE-203ENST00000425444 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.49□□□□□ -0.575e-9■■■■■ 37
SGCE-203ENST00000425444 ARHGAP21Q5T5U3 1957 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 TMEM120BA0PK00 339 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 H3BML4 177 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 SEC14L5O43304 696 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 PEPDP12955 493 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 ZNF708P17019 499 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 CD53P19397 219 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 CTSSP25774 331 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 OPRM1P35372 400 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 DIO3P55073 304 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 CLDN8P56748 225 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 CLDN18P56856 261 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 BST1Q10588 318 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 DAZAP2Q15038 168 aaPredicted RBP11.48□□□□□ -0.57
SGCE-203ENST00000425444 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.48□□□□□ -0.57
SGCE-203ENST00000425444 CDC73Q6P1J9 531 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 PLXDC2Q6UX71 529 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 APOOLQ6UXV4 268 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 RIMKLAQ8IXN7 391 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 GCNT2Q8N0V5 402 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 OR5M1Q8NGP8 315 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 SFXN5Q8TD22 340 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 CDS1Q92903 461 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 RNASE6Q93091 150 aaKnown RBP11.48□□□□□ -0.57
SGCE-203ENST00000425444 MOAP1Q96BY2 351 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 COQ8BQ96D53 544 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 C1GALT1C1Q96EU7 318 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 Q96MF0 132 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 ZFP3Q96NJ6 502 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 STACQ99469 402 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 SORT1Q99523 831 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 PIGQQ9BRB3 760 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 BDH2Q9BUT1 245 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 BTBD2Q9BX70 525 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 ACTRT3Q9BYD9 372 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 DPY30Q9C005 99 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 ACBD3Q9H3P7 528 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 PIGUQ9H490 435 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 PLEKHF2Q9H8W4 249 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 HHATLQ9HCP6 504 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 DUSP22Q9NRW4 184 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 NKIRAS1Q9NYS0 192 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 VDAC3Q9Y277 283 aa11.48□□□□□ -0.57
SGCE-203ENST00000425444 OR2M5A3KFT3 312 aa11.47□□□□□ -0.57
SGCE-203ENST00000425444 ALG1L2C9J202 215 aa11.47□□□□□ -0.57
SGCE-203ENST00000425444 CRLF1O75462 422 aa11.47□□□□□ -0.57
SGCE-203ENST00000425444 NGFRP08138 427 aa11.47□□□□□ -0.57
SGCE-203ENST00000425444 LCN1P31025 176 aa11.47□□□□□ -0.57
SGCE-203ENST00000425444 ZNF41P51814 821 aaPredicted RBP11.47□□□□□ -0.57
SGCE-203ENST00000425444 EEFSECP57772 596 aaKnown RBP11.47□□□□□ -0.57
SGCE-203ENST00000425444 C21orf58P58505 322 aa11.47□□□□□ -0.57
SGCE-203ENST00000425444 B3GALT5-AS1P59052 145 aa11.47□□□□□ -0.57
SGCE-203ENST00000425444 BCL2A1Q16548 175 aa11.47□□□□□ -0.57
SGCE-203ENST00000425444 OR4F3Q6IEY1 312 aa11.47□□□□□ -0.57
SGCE-203ENST00000425444 HMBOX1Q6NT76 420 aa11.47□□□□□ -0.57
SGCE-203ENST00000425444 BHLHB9Q6PI77 547 aa11.47□□□□□ -0.57
SGCE-203ENST00000425444 MISPQ8IVT2 679 aa11.47□□□□□ -0.57
SGCE-203ENST00000425444 OR4A15Q8NGL6 344 aa11.47□□□□□ -0.57
SGCE-203ENST00000425444 OR4C3Q8NH37 302 aa11.47□□□□□ -0.57
SGCE-203ENST00000425444 PSMA8Q8TAA3 256 aa11.47□□□□□ -0.57
SGCE-203ENST00000425444 WNT2BQ93097 391 aa11.47□□□□□ -0.57
SGCE-203ENST00000425444 INTS12Q96CB8 462 aaKnown RBP11.47□□□□□ -0.57
SGCE-203ENST00000425444 SH3YL1Q96HL8 342 aaPredicted RBP11.47□□□□□ -0.57
SGCE-203ENST00000425444 SFXN3Q9BWM7 321 aa11.47□□□□□ -0.57
SGCE-203ENST00000425444 UBQLN4Q9NRR5 601 aa11.47□□□□□ -0.57
SGCE-203ENST00000425444 PNPOQ9NVS9 261 aa11.47□□□□□ -0.57
SGCE-203ENST00000425444 GIN1Q9NXP7 522 aa11.47□□□□□ -0.57
SGCE-203ENST00000425444 CLCF1Q9UBD9 225 aa11.47□□□□□ -0.57
SGCE-203ENST00000425444 FOXD3Q9UJU5 478 aaPredicted RBP11.47□□□□□ -0.57
SGCE-203ENST00000425444 PCDHGB4Q9UN71 923 aa11.47□□□□□ -0.57
SGCE-203ENST00000425444 TGP01266 2768 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 MED12Q93074 2177 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 IGLV3-32A0A0A0MS00 114 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 RNF103-CHMP3A0A140T963 221 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 SLC22A20A6NK97 555 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 SHISA8B8ZZ34 492 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms