RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 AMDHD1Q96NU7 426 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 FMO2Q99518 471 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 FUT8Q9BYC5 575 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 GRIP2Q9C0E4 1043 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 SLCO5A1Q9H2Y9 848 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 KCNF1Q9H3M0 494 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 GLIPR2Q9H4G4 154 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 SH3BP4Q9P0V3 963 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 LPAR3Q9UBY5 353 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 POU2F3Q9UKI9 436 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 MGAT4BQ9UQ53 548 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 TIMM22Q9Y584 194 aa10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 FLNAP21333 2647 aaKnown RBP10.95□□□□□ -0.66
HLA-DQB3-203ENST00000425319 FREM3P0C091 2139 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 A0A1W2PRB8 838 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 OVOL3O00110 214 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 SLC28A1O00337 649 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 RGS14O43566 566 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 RSL1D1O76021 490 aaKnown RBP10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 NKX2-2O95096 273 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 OXSR1O95747 527 aaPredicted RBP10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 CHEK2O96017 543 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ADAP00813 363 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 OPN1LWP04000 364 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 NID1P14543 1247 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ELK4P28324 431 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 AGTR1P30556 359 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ACVR1BP36896 505 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 NUDT6P53370 316 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 PRKAA2P54646 552 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 SLC18A2Q05940 514 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 HSPB3Q12988 150 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 RAB35Q15286 201 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 TRADDQ15628 312 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 TMEM44Q2T9K0 475 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 FAM71E1Q6IPT2 247 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 KLHL17Q6TDP4 642 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 CLEC2AQ6UVW9 174 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 C22orf34Q6ZV56 151 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 COX18Q8N8Q8 333 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 BANPQ8N9N5 519 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 OR2W6PQ8NHA6 318 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 DCAKDQ8WVC6 231 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 IGFBPL1Q8WX77 278 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 PIK3R3Q92569 461 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 PPCDCQ96CD2 204 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 L3HYPDHQ96EM0 354 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 C11orf24Q96F05 449 aaPredicted RBP10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 KCNK17Q96T54 332 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 POTEKPQ9BYX7 375 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 CDC42EP4Q9H3Q1 356 aaKnown RBP10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 SERINC1Q9NRX5 453 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 MED17Q9NVC6 651 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 KLHL9Q9P2J3 617 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 GPC6Q9Y625 555 aaPredicted RBP10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 KIAA1549Q9HCM3 1950 aa10.94□□□□□ -0.66
HLA-DQB3-203ENST00000425319 A0A0J9YW62 118 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 A0A1W2PQD3 144 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ESYT3A0FGR9 886 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 SHISA8B8ZZ34 492 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 KIF2AO00139 706 aaPredicted RBP10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ZNF195O14628 629 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 SSX4O60224 188 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 KRT16P08779 473 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 FAM157CP0CG43 387 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 MYL2P10916 166 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 SFTPDP35247 375 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 CDKN1AP38936 164 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 RPL3P39023 403 aaKnown RBP10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ETF1P62495 437 aaKnown RBP10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 POU6F2P78424 691 aaPredicted RBP10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 TP53BP2Q13625 1128 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 PPA1Q15181 289 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 TAB1Q15750 504 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 STK11Q15831 433 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 MFSD12Q6NUT3 480 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 NOXRED1Q6NXP6 359 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 TMEM108Q6UXF1 575 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 TIFABQ6ZNK6 161 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 FCRLAQ7L513 359 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 BHLHA15Q7RTS1 189 aaPredicted RBP10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 R3HCC1LQ7Z5L2 792 aaKnown RBP10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 TUSC5Q8IXB3 177 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ZNF100Q8IYN0 542 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 FBXL14Q8N1E6 418 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 GATSQ8NAP1 163 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 MAPK1IP1LQ8NDC0 245 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 MNS1Q8NEH6 495 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 OR4C3Q8NH37 302 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 RAB3IL1Q8TBN0 382 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 PIWIL2Q8TC59 973 aaKnown RBP10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 PHOSPHO1Q8TCT1 267 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ACMSDQ8TDX5 336 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 JADE3Q92613 823 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 SH3YL1Q96HL8 342 aaPredicted RBP10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 TMEM185BQ9H7F4 350 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ZDHHC18Q9NUE0 388 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 FLRT3Q9NZU0 649 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 TMEM216Q9P0N5 145 aa10.93□□□□□ -0.66
HLA-DQB3-203ENST00000425319 KLHL13Q9P2N7 655 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms