RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 PRKCIP41743 596 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 CBX5P45973 191 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 HNRNPFP52597 415 aaKnown RBP2.64□□□□□ -1.99
LINC01040-201ENST00000425048 RPL27P61353 136 aaKnown RBP2.64□□□□□ -1.99
LINC01040-201ENST00000425048 C2orf54Q08AI8 447 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 KLHL30Q0D2K2 578 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 SMARCB1Q12824 385 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 AIMP1Q12904 312 aaKnown RBP2.64□□□□□ -1.99
LINC01040-201ENST00000425048 LCP2Q13094 533 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 GIT2Q14161 759 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 STK11Q15831 433 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 KCNJ8Q15842 424 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 UAP1Q16222 522 aaPredicted RBP2.64□□□□□ -1.99
LINC01040-201ENST00000425048 ZCWPW2Q504Y3 356 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 PAGE2BQ5JRK9 111 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 ZNF691Q5VV52 312 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 METTL11BQ5VVY1 283 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 SHEQ5VZ18 495 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 NIPAL1Q6NVV3 410 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 NEK5Q6P3R8 708 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 DCLRE1AQ6PJP8 1040 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 PPP1R21Q6ZMI0 780 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 CYP4V2Q6ZWL3 525 aaPredicted RBP2.64□□□□□ -1.99
LINC01040-201ENST00000425048 APTXQ7Z2E3 356 aaKnown RBP2.64□□□□□ -1.99
LINC01040-201ENST00000425048 LRRC34Q8IZ02 419 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 CSGALNACT2Q8N6G5 542 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 ATP6V0D2Q8N8Y2 350 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 ICA1LQ8NDH6 482 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 GIPC3Q8TF64 312 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 CHMP6Q96FZ7 201 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 RBM14Q96PK6 669 aaKnown RBP2.64□□□□□ -1.99
LINC01040-201ENST00000425048 TMEM237Q96Q45 408 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 CALN1Q9BXU9 219 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 MRPL9Q9BYD2 267 aaKnown RBP2.64□□□□□ -1.99
LINC01040-201ENST00000425048 LSG1Q9H089 658 aaKnown RBP2.64□□□□□ -1.99
LINC01040-201ENST00000425048 SIAEQ9HAT2 523 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 PLGRKTQ9HBL7 147 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 C12orf4Q9NQ89 552 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 GID8Q9NWU2 228 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 GIN1Q9NXP7 522 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 TAS2R16Q9NYV7 291 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 TRIM10Q9UDY6 481 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 KCNN3Q9UGI6 736 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 FAM153AQ9UHL3 310 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 ATPIF1Q9UII2 106 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 LIPGQ9Y5X9 500 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 ZFYVE9O95405 1425 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 ADGRB1O14514 1584 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 CDC42BPGQ6DT37 1551 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 VWDEQ8N2E2 1590 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 C4AP0C0L4 1744 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 C4BP0C0L5 1744 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 XRN1Q8IZH2 1706 aaKnown RBP2.64□□□□□ -1.99
LINC01040-201ENST00000425048 MAGI1Q96QZ7 1491 aaPredicted RBP2.64□□□□□ -1.99
LINC01040-201ENST00000425048 DUOX2Q9NRD8 1548 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 A0A1W2PP64 1363 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 CPDO75976 1380 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 PTPRUQ92729 1446 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 TRAV6A0A075B6T7 132 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 KIR2DL5BA0A0G2JN68 375 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 KIR2DL5BA0A0G2JPC4 375 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 MACROD2A1Z1Q3 448 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 GOLGA8IPA6NC78 632 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 MFSD2BA6NFX1 497 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 URADA6NGE7 173 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 SNTNA6NMZ2 147 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 CENPBD1B2RD01 187 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 H0YC42 278 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 YKT6O15498 198 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 CLOCKO15516 846 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 STBD1O95210 358 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 OR5F1O95221 314 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 GOT2P00505 430 aaKnown RBP2.63□□□□□ -1.99
LINC01040-201ENST00000425048 TFPTP0C1Z6 253 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 ZCCHC18P0CG32 403 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 SFTPCP11686 197 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 ICAM2P13598 275 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 VCLP18206 1134 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 CXCR2P25025 360 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 HPDP32754 393 aaPredicted RBP2.63□□□□□ -1.99
LINC01040-201ENST00000425048 IFNA8P32881 189 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 PHBP35232 272 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 SLC26A3P40879 764 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 SLC1A1P43005 524 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 XCR1P46094 333 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 EIF2B2P49770 351 aaKnown RBP2.63□□□□□ -1.99
LINC01040-201ENST00000425048 PLTPP55058 493 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 DIO3P55073 304 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 BPIFB3P59826 476 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 NAA20P61599 178 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 POLR2GP62487 172 aaKnown RBP eCLIP2.63□□□□□ -1.99
LINC01040-201ENST00000425048 MYL5Q02045 173 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 AP1B1Q10567 949 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 SIM2Q14190 667 aaPredicted RBP2.63□□□□□ -1.99
LINC01040-201ENST00000425048 MAPRE2Q15555 327 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 SGCBQ16585 318 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 KCTD21Q4G0X4 260 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 CCDC58Q4VC31 144 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 SPECC1LQ69YQ0 1117 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 MZT2BQ6NZ67 158 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms