RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 SF3A3Q12874 501 aaKnown RBP eCLIP9.22□□□□□ -0.939e-6■■□□□ 12.4
HDLBP-206ENST00000417540 MAD2L1Q13257 205 aaPredicted RBP9.22□□□□□ -0.93
HDLBP-206ENST00000417540 TMEM44Q2T9K0 475 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 CTU2Q2VPK5 515 aaKnown RBP9.22□□□□□ -0.93
HDLBP-206ENST00000417540 LSM12Q3MHD2 195 aaKnown RBP9.22□□□□□ -0.93
HDLBP-206ENST00000417540 FLYWCH1Q4VC44 716 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 RPS26P11Q5JNZ5 115 aaPredicted RBP9.22□□□□□ -0.93
HDLBP-206ENST00000417540 PDZK1Q5T2W1 519 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 TMEM211Q6ICI0 200 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 FRRS1Q6ZNA5 592 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 ACAD11Q709F0 780 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 GDF7Q7Z4P5 450 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 CROCCP2Q86T23 111 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 LACC1Q8IV20 430 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 EID3Q8N140 333 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 C10orf111Q8N326 155 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 TMCO5AQ8N6Q1 288 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 OR8J2Q8NGG1 315 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 RFWD2Q8NHY2 731 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 ASB5Q8WWX0 329 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 TESCQ96BS2 214 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 DNAJA3Q96EY1 480 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 SLC35A5Q9BS91 424 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 BTBD2Q9BX70 525 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 ZNF350Q9GZX5 532 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 PIGUQ9H490 435 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 RUBCNLQ9H714 662 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 C3orf14Q9HBI5 128 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 CARD8Q9Y2G2 431 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.22□□□□□ -0.93
HDLBP-206ENST00000417540 ZNF337Q9Y3M9 751 aa9.22□□□□□ -0.93
HDLBP-206ENST00000417540 NDUFB5O43674 189 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 FCMRO60667 390 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 AQP8O94778 261 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 EPPINO95925 133 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 ACTL6AO96019 429 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 TMIGD3P0DMS9 266 aaPredicted RBP9.21□□□□□ -0.94
HDLBP-206ENST00000417540 HOXB9P17482 250 aaPredicted RBP9.21□□□□□ -0.94
HDLBP-206ENST00000417540 DDX5P17844 614 aaKnown RBP9.21□□□□□ -0.94
HDLBP-206ENST00000417540 TBXA2RP21731 343 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 MATN1P21941 496 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 PSMA4P25789 261 aaKnown RBP9.21□□□□□ -0.94
HDLBP-206ENST00000417540 CCR4P51679 360 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 SLC18A1P54219 525 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 GANABQ14697 944 aaKnown RBP9.21□□□□□ -0.94
HDLBP-206ENST00000417540 MAPK11Q15759 364 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 SMU1Q2TAY7 513 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 VPS26BQ4G0F5 336 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 PDCD4Q53EL6 469 aaKnown RBP9.21□□□□□ -0.94
HDLBP-206ENST00000417540 ATG16L1Q676U5 607 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 TYW3Q6IPR3 259 aaKnown RBP9.21□□□□□ -0.94
HDLBP-206ENST00000417540 PPP4R4Q6NUP7 873 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 SLC2A7Q6PXP3 512 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 C6orf120Q7Z4R8 191 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 LUZP2Q86TE4 346 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 RNF130Q86XS8 419 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 GRAMD2AQ8IUY3 354 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 ZZZ3Q8IYH5 903 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 ANKFN1Q8N957 763 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 LILRB4Q8NHJ6 448 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 CEP70Q8NHQ1 597 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 FNDC9Q8TBE3 224 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 RAB3IL1Q8TBN0 382 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 PHOSPHO1Q8TCT1 267 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 INTS12Q96CB8 462 aaKnown RBP9.21□□□□□ -0.94
HDLBP-206ENST00000417540 ADGRG7Q96K78 797 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 CCDC115Q96NT0 180 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 PINK1Q9BXM7 581 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 SRXN1Q9BYN0 137 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 ENKD1Q9H0I2 346 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 COQ10BQ9H8M1 238 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 MKLN1Q9UL63 735 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 CLEC4AQ9UMR7 237 aa9.21□□□□□ -0.94
HDLBP-206ENST00000417540 AKAP6Q13023 2319 aa9.2□□□□□ -0.94
HDLBP-206ENST00000417540 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.2□□□□□ -0.94
HDLBP-206ENST00000417540 A0A1W2PNV4 684 aa9.2□□□□□ -0.94
HDLBP-206ENST00000417540 CD8B2A6NJW9 211 aa9.2□□□□□ -0.94
HDLBP-206ENST00000417540 HMGN4O00479 90 aa9.2□□□□□ -0.94
HDLBP-206ENST00000417540 SCDO00767 359 aa9.2□□□□□ -0.94
HDLBP-206ENST00000417540 EIF1AYO14602 144 aaKnown RBP9.2□□□□□ -0.94
HDLBP-206ENST00000417540 TNFSF11O14788 317 aa9.2□□□□□ -0.94
HDLBP-206ENST00000417540 KLF11O14901 512 aa9.2□□□□□ -0.94
HDLBP-206ENST00000417540 TNFSF13O75888 250 aa9.2□□□□□ -0.94
HDLBP-206ENST00000417540 H6PDO95479 791 aa9.2□□□□□ -0.94
HDLBP-206ENST00000417540 PGRP06401 933 aa9.2□□□□□ -0.94
HDLBP-206ENST00000417540 NGFRP08138 427 aa9.2□□□□□ -0.94
HDLBP-206ENST00000417540 CAPN3P20807 821 aa9.2□□□□□ -0.94
HDLBP-206ENST00000417540 UQCRC1P31930 480 aa9.2□□□□□ -0.94
HDLBP-206ENST00000417540 S100A3P33764 101 aa9.2□□□□□ -0.94
HDLBP-206ENST00000417540 SFTPDP35247 375 aa9.2□□□□□ -0.94
HDLBP-206ENST00000417540 PTGER4P35408 488 aa9.2□□□□□ -0.94
HDLBP-206ENST00000417540 CPOXP36551 454 aa9.2□□□□□ -0.94
HDLBP-206ENST00000417540 KHKP50053 298 aa9.2□□□□□ -0.94
HDLBP-206ENST00000417540 ASCL1P50553 236 aa9.2□□□□□ -0.94
HDLBP-206ENST00000417540 MVDP53602 400 aa9.2□□□□□ -0.94
HDLBP-206ENST00000417540 CLNS1AP54105 237 aaKnown RBP9.2□□□□□ -0.94
HDLBP-206ENST00000417540 PSMD4P55036 377 aaKnown RBP9.2□□□□□ -0.94
HDLBP-206ENST00000417540 PSPHP78330 225 aa9.2□□□□□ -0.94
HDLBP-206ENST00000417540 TLE4Q04727 773 aa9.2□□□□□ -0.94
HDLBP-206ENST00000417540 SKP2Q13309 424 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms