RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 AKR1C4P17516 323 aa12.95□□□□□ -0.34
SMARCA4-202ENST00000413806 HOXC13P31276 330 aa12.95□□□□□ -0.34
SMARCA4-202ENST00000413806 SERPINF1P36955 418 aa12.95□□□□□ -0.34
SMARCA4-202ENST00000413806 VIPR2P41587 438 aa12.95□□□□□ -0.34
SMARCA4-202ENST00000413806 PITPNBP48739 271 aa12.95□□□□□ -0.34
SMARCA4-202ENST00000413806 NNATQ16517 81 aa12.95□□□□□ -0.34
SMARCA4-202ENST00000413806 ADAMTS16Q8TE57 1224 aa12.95□□□□□ -0.34
SMARCA4-202ENST00000413806 UBXN10Q96LJ8 280 aa12.95□□□□□ -0.34
SMARCA4-202ENST00000413806 NWD2Q9ULI1 1742 aa12.95□□□□□ -0.34
SMARCA4-202ENST00000413806 VSTM2BA6NLU5 285 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 GABRR3A8MPY1 467 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 M0R3H8 397 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 PNMTP11086 282 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 SERTAD2Q14140 314 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 OR5AK2Q8NH90 309 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 PAQR8Q8TEZ7 354 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 ALG8Q9BVK2 526 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 POLHQ9Y253 713 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 CHD4Q14839 1912 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 TCRBV5S1A1TA0A578 114 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 MAGEB1P43366 347 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 MFSD13AQ14CX5 517 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 PAN3Q58A45 887 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 PGM2L1Q6PCE3 622 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 SHFQ7M4L6 423 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 UBTD2Q8WUN7 234 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 ASB11Q8WXH4 323 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 HOXB13Q92826 284 aaPredicted RBP12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 DDIT4LQ96D03 193 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 STRADBQ9C0K7 418 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 LDAHQ9H6V9 325 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 SIAEQ9HAT2 523 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 HEMK1Q9Y5R4 338 aaPredicted RBP12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 SLC22A5O76082 557 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 PRLHRP49683 370 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 KIR2DS3Q14952 304 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 TRMT10AQ8TBZ6 339 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 CREB3L4Q8TEY5 395 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 KCNJ16Q9NPI9 418 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 LHX3Q9UBR4 397 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 PPP1R3DO95685 299 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 CAPNS1P04632 268 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 ALDOCP09972 364 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 UBBP0CG47 229 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 UBCP0CG48 685 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 AMY2BP19961 511 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 CCR7P32248 378 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 PTH2RP49190 550 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 RAB4BP61018 213 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 RPS27AP62979 156 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 UBA52P62987 128 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 HHEXQ03014 270 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 SF3B4Q15427 424 aaKnown RBP eCLIP12.94□□□□□ -0.343e-7■■■■■ 27.6
SMARCA4-202ENST00000413806 PXDC1Q5TGL8 231 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 C1orf94Q6P1W5 598 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 PLXDC1Q8IUK5 500 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 NINJ1Q92982 152 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 FZD3Q9NPG1 666 aa12.94□□□□□ -0.34
SMARCA4-202ENST00000413806 RPS10-NUDT3A0A1W2PQS6 291 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 NAP1L6A6NFF2 107 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 POM121CA8CG34 1229 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 IL33O95760 270 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 CST5P28325 142 aaPredicted RBP12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 CPOXP36551 454 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 RPS5P46782 204 aaKnown RBP12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 RPS10P46783 165 aaKnown RBP12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 SLC6A8P48029 635 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 HTRA4P83105 476 aaPredicted RBP12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 PIN1Q13526 163 aaPredicted RBP12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 LRFN4Q6PJG9 635 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 PAQR9Q6ZVX9 377 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 B3GNT7Q8NFL0 401 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 PEX11GQ96HA9 241 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 ADAMTS4O75173 837 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 TIMP1P01033 207 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 IL1RNP18510 177 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 HNRNPA2B1P22626 353 aaKnown RBP12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 GRPRP30550 384 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 MRPL49Q13405 166 aaKnown RBP12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 PEA15Q15121 130 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 HNRNPA1L2Q32P51 320 aaKnown RBP12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 MRPL41Q8IXM3 137 aaKnown RBP12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 SLC7A13Q8TCU3 470 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 MYLIPQ8WY64 445 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 BADQ92934 168 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 CDCA3Q99618 268 aaPredicted RBP12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 PLCH1Q4KWH8 1693 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 MEGF11A6BM72 1044 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 TIMP2P16035 220 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 RAB6AP20340 208 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 SSTR4P31391 388 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 MC3RP41968 323 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 C1orf61Q13536 156 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 BEND4Q6ZU67 534 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 KCTD20Q7Z5Y7 419 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 OR9A2Q8NGT5 310 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 OR5W2Q8NH69 310 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 OR7A17O14581 309 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 SEMA4FO95754 770 aa12.93□□□□□ -0.34
SMARCA4-202ENST00000413806 TPT1P13693 172 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms