RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 TMEM163Q8TC26 289 aa15.31■□□□□ 0.04
CDK11B-204ENST00000407249 GATAD2BQ8WXI9 593 aa15.31■□□□□ 0.04
CDK11B-204ENST00000407249 SORCS1Q8WY21 1168 aa15.31■□□□□ 0.04
CDK11B-204ENST00000407249 RAB8BQ92930 207 aa15.31■□□□□ 0.04
CDK11B-204ENST00000407249 CHMP1AQ9HD42 196 aaPredicted RBP15.31■□□□□ 0.04
CDK11B-204ENST00000407249 B3GAT2Q9NPZ5 323 aa15.31■□□□□ 0.04
CDK11B-204ENST00000407249 SLAMF7Q9NQ25 335 aa15.31■□□□□ 0.04
CDK11B-204ENST00000407249 NIT2Q9NQR4 276 aa15.31■□□□□ 0.04
CDK11B-204ENST00000407249 NLKQ9UBE8 527 aa15.31■□□□□ 0.04
CDK11B-204ENST00000407249 HSPB11Q9Y547 144 aa15.31■□□□□ 0.04
CDK11B-204ENST00000407249 MYOFQ9NZM1 2061 aa15.31■□□□□ 0.04
CDK11B-204ENST00000407249 EDDM13A0A1B0GTR0 161 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 ANKDD1BA6NHY2 528 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 PPM1DO15297 605 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 LYRM1O43325 122 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 ELFN1P0C7U0 828 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 SMIM11AP58511 58 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 PIN1Q13526 163 aaPredicted RBP15.3■□□□□ 0.04
CDK11B-204ENST00000407249 KLHL22Q53GT1 634 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 CLLU1Q5K131 121 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 FAM109BQ6ICB4 259 aaPredicted RBP15.3■□□□□ 0.04
CDK11B-204ENST00000407249 TEX261Q6UWH6 196 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 CD300LDQ6UXZ3 194 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 ZNF765Q7L2R6 523 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 SLC43A2Q8N370 569 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 MARVELD1Q9BSK0 173 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 SORBS1Q9BX66 1292 aaKnown RBP15.3■□□□□ 0.04
CDK11B-204ENST00000407249 GPR61Q9BZJ8 451 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 OR6C2Q9NZP2 312 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 GSTK1Q9Y2Q3 226 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 DYRK1BQ9Y463 629 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 U3KQ87 197 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 FAM240BA0A1B0GVZ2 78 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 HRO43593 1189 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 C1orf105O95561 183 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 GABRA5P31644 462 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 NUP62P37198 522 aaPredicted RBP15.3■□□□□ 0.04
CDK11B-204ENST00000407249 PRLHRP49683 370 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 CLDN20P56880 219 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 PDGFRLQ15198 375 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 HIST2H2AA3Q6FI13 130 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 PODNL1Q6PEZ8 512 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 CD200R1LQ6Q8B3 271 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 SSX9Q7RTT3 188 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 KDF1Q8NAX2 398 aaPredicted RBP15.3■□□□□ 0.04
CDK11B-204ENST00000407249 TMEM145Q8NBT3 493 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 OR8D1Q8WZ84 308 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 GLYATL1Q969I3 302 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 RIMS4Q9H426 269 aaPredicted RBP15.3■□□□□ 0.04
CDK11B-204ENST00000407249 EPHX3Q9H6B9 360 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 MRPS18AQ9NVS2 196 aaKnown RBP15.3■□□□□ 0.04
CDK11B-204ENST00000407249 A4GNTQ9UNA3 340 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 ZNF806P0C7X5 589 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 MMP11P24347 488 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 RAB40BQ12829 278 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 METAP1DQ6UB28 335 aaPredicted RBP15.3■□□□□ 0.04
CDK11B-204ENST00000407249 PARS2Q7L3T8 475 aaKnown RBP15.3■□□□□ 0.04
CDK11B-204ENST00000407249 ZNF740Q8NDX6 193 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 SMARCD2Q92925 531 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 LRRC3BQ96PB8 259 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 KCNJ15Q99712 375 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 SGPP1Q9BX95 441 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 ISYNA1Q9NPH2 558 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 DZANK1Q9NVP4 752 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 MCUBQ9NWR8 336 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 SH3BGRL2Q9UJC5 107 aa15.3■□□□□ 0.04
CDK11B-204ENST00000407249 FAM221BA6H8Z2 402 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 H7C2Y5 167 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 HPGDSO60760 199 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 EIF3GO75821 320 aaKnown RBP eCLIP15.29■□□□□ 0.04
CDK11B-204ENST00000407249 ACP2P11117 423 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 EN2P19622 333 aaPredicted RBP15.29■□□□□ 0.04
CDK11B-204ENST00000407249 G0S2P27469 103 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 EVX1P49640 407 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 CDK5Q00535 292 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 DSG2Q14126 1118 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 KIAA1211LQ6NV74 962 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 COMTD1Q86VU5 262 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 PPP1R16AQ96I34 528 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 LURAP1Q96LR2 239 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 C10orf90Q96M02 699 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 LINC00052Q96N35 136 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 DCLRE1CQ96SD1 692 aaKnown RBP15.29■□□□□ 0.04
CDK11B-204ENST00000407249 TMEM43Q9BTV4 400 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 TRPV4Q9HBA0 871 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 FGF20Q9NP95 211 aaPredicted RBP15.29■□□□□ 0.04
CDK11B-204ENST00000407249 DEC1Q9P2X7 70 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 FBXL21Q9UKT6 434 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 ANHXE9PGG2 379 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 HMGN4O00479 90 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 CASKO14936 926 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 HNRNPKP61978 463 aaKnown RBP eCLIP15.29■□□□□ 0.04
CDK11B-204ENST00000407249 RRAS2P62070 204 aaPredicted RBP15.29■□□□□ 0.04
CDK11B-204ENST00000407249 ABATP80404 500 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 LSM11P83369 360 aaKnown RBP eCLIP15.29■□□□□ 0.04
CDK11B-204ENST00000407249 HNRNPA1L2Q32P51 320 aaKnown RBP15.29■□□□□ 0.04
CDK11B-204ENST00000407249 TCEAL5Q5H9L2 206 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 AP2M1Q96CW1 435 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 RSPRY1Q96DX4 576 aa15.29■□□□□ 0.04
CDK11B-204ENST00000407249 COQ10AQ96MF6 247 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms