RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 DTNAQ9Y4J8 743 aa13.24□□□□□ -0.29
CDPF1-203ENST00000404583 TRBV5-3A0A0A0MS03 114 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 BCKDKO14874 412 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 KIAA0513O60268 411 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 TNFRSF21O75509 655 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 CHRM4P08173 479 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 GUSBP08236 651 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 RNF224P0DH78 156 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 NR2F1P10589 423 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 BMP7P18075 431 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 HK1P19367 917 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 MAGEA8P43361 318 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 DSTNP60981 165 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 CRYZQ08257 329 aaKnown RBP13.23□□□□□ -0.29
CDPF1-203ENST00000404583 MAPK11Q15759 364 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 ZNF141Q15928 474 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 MAPK14Q16539 360 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 WLSQ5T9L3 541 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 AP1ARQ63HQ0 302 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 ZNF585AQ6P3V2 769 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 IFNEQ86WN2 208 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 ZNF619Q8N2I2 560 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 DPP10Q8N608 796 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 ABTB1Q969K4 478 aaPredicted RBP13.23□□□□□ -0.29
CDPF1-203ENST00000404583 DTNBP1Q96EV8 351 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 TRNT1Q96Q11 434 aaKnown RBP13.23□□□□□ -0.29
CDPF1-203ENST00000404583 TIMP4Q99727 224 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 KLHDC3Q9BQ90 382 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 NSRP1Q9H0G5 558 aaKnown RBP13.23□□□□□ -0.29
CDPF1-203ENST00000404583 QRSL1Q9H0R6 528 aaKnown RBP13.23□□□□□ -0.29
CDPF1-203ENST00000404583 SLC38A1Q9H2H9 487 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 RUBCNLQ9H714 662 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 POLE3Q9NRF9 147 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 MRGBPQ9NV56 204 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 ALKBH4Q9NXW9 302 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 P2RX2Q9UBL9 471 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 CARD8Q9Y2G2 431 aa13.23□□□□□ -0.29
CDPF1-203ENST00000404583 PHF3Q92576 2039 aaKnown RBP13.23□□□□□ -0.29
CDPF1-203ENST00000404583 LOC100653049A0A140TA62 436 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 H3BNH8 94 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 GTPBP1O00178 669 aaKnown RBP13.22□□□□□ -0.29
CDPF1-203ENST00000404583 FBP2O00757 339 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 OIP5O43482 229 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 HCRTR2O43614 444 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 SNX3O60493 162 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 KRT34O76011 436 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 NUDT7P0C024 238 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 ESRRAP11474 423 aaPredicted RBP13.22□□□□□ -0.29
CDPF1-203ENST00000404583 MSX1P28360 303 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 HPCAP84074 193 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 ZNF117Q03924 483 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 FADDQ13158 208 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 GANABQ14697 944 aaKnown RBP13.22□□□□□ -0.29
CDPF1-203ENST00000404583 NDUFAF6Q330K2 333 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 RUNDC3AQ59EK9 446 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 NHSL2Q5HYW2 709 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 DCST1Q5T197 706 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 VASNQ6EMK4 673 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 CBLN3Q6UW01 205 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 ARSKQ6UWY0 536 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 LRRC74BQ6ZQY2 392 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 NCCRP1Q6ZVX7 275 aaPredicted RBP13.22□□□□□ -0.29
CDPF1-203ENST00000404583 DHDDSQ86SQ9 333 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 C10orf111Q8N326 155 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 OR5M1Q8NGP8 315 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 B4GALNT2Q8NHY0 566 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 C1GALT1C1Q96EU7 318 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 UGT2B28Q9BY64 529 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 RAD21L1Q9H4I0 556 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 IKZF5Q9H5V7 419 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.22□□□□□ -0.29
CDPF1-203ENST00000404583 VDAC3Q9Y277 283 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 MEMO1Q9Y316 297 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 ICE1Q9Y2F5 2266 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 ARHGAP21Q5T5U3 1957 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 SERINC4A6NH21 518 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 SHISA8B8ZZ34 492 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 LDLRP01130 860 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 BCHEP06276 602 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 TFPTP0C1Z6 253 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 PPIBP23284 216 aaKnown RBP13.22□□□□□ -0.29
CDPF1-203ENST00000404583 ADSLP30566 484 aaPredicted RBP13.22□□□□□ -0.29
CDPF1-203ENST00000404583 STARP49675 285 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 GFRA1P56159 465 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 B3GALT5-AS1P59052 145 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 NFYCQ13952 458 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 ZNF630Q2M218 657 aaPredicted RBP13.22□□□□□ -0.29
CDPF1-203ENST00000404583 HIST2H2BCQ6DN03 193 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 MTDHQ86UE4 582 aaKnown RBP13.22□□□□□ -0.29
CDPF1-203ENST00000404583 SNX32Q86XE0 403 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 RPRMLQ8N4K4 120 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 SSC4DQ8WTU2 575 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 SLC38A5Q8WUX1 472 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 MAL2Q969L2 176 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 CCDC120Q96HB5 630 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 SFXN2Q96NB2 322 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 CGREF1Q99674 301 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 CPPED1Q9BRF8 314 aaPredicted RBP13.22□□□□□ -0.29
CDPF1-203ENST00000404583 TRIM8Q9BZR9 551 aa13.22□□□□□ -0.29
CDPF1-203ENST00000404583 TP63Q9H3D4 680 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms