RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 FAM3CQ92520 227 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 C1orf147Q96MC9 270 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 C12orf66Q96MD2 445 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 MYCBPQ99417 103 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 RIT2Q99578 217 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 EDEM2Q9BV94 578 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 POLD4Q9HCU8 107 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 ABCD2Q9UBJ2 740 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 LCMT1Q9UIC8 334 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 MRPS33Q9Y291 106 aaKnown RBP2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 L3MBTL1Q9Y468 752 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 E9PLD3 99 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 G3V4G9 280 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 TBX19O60806 448 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 RAMP1O60894 148 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 DUSP14O95147 198 aaKnown RBP2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 THY1P04216 161 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 HBQ1P09105 142 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 TPSB2P20231 275 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 IGHV1-2P23083 117 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 PSMA2P25787 234 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 GDF1P27539 372 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 CBX1P83916 185 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 VLDLRP98155 873 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 KCNJ11Q14654 390 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 LAGE3Q14657 143 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 TGIF1Q15583 401 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 TPSAB1Q15661 275 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 SLC5A12Q1EHB4 618 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 Q1RN00 199 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 QRICH1Q2TAL8 776 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 ATAD3BQ5T9A4 648 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 TTC23Q5W5X9 447 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 PVRIGQ6DKI7 326 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 ZNF774Q6NX45 483 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 SERINC5Q86VE9 423 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 C9orf40Q8IXQ3 194 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 TMEM123Q8N131 208 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 CD177Q8N6Q3 437 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 KLHL30-AS1Q8NEE0 82 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 STXBP6Q8NFX7 210 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 OR52M1Q8NGK5 317 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 MYLPFQ96A32 169 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 ANKRD9Q96BM1 317 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 TMEM80Q96HE8 168 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 SLC6A7Q99884 636 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 ELOVL4Q9GZR5 314 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 NXF5Q9H1B4 397 aaKnown RBP2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 OPN3Q9H1Y3 402 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 GALPQ9UBC7 116 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 PTBP2Q9UKA9 531 aaKnown RBP2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 NAALAD2Q9Y3Q0 740 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 PPIAL4AQ9Y536 164 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 SPACA6W5XKT8 324 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 KDRP35968 1356 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 RALGAPA1Q6GYQ0 2036 aa2.95□□□□□ -1.94
HMGB1P17-201ENST00000403495 IGHV3-35A0A0C4DH35 117 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 CDX4O14627 284 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 PRRG1O14668 218 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 GPAA1O43292 621 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 TRIM3O75382 744 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 GPX5O75715 221 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 CD55P08174 381 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 GIG44P09565 113 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 BCKDHAP12694 445 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 FASP25445 335 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 MDH2P40926 338 aaKnown RBP2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 GBX2P52951 348 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 SLC25A1P53007 311 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 SLC8A3P57103 927 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 KRTAP10-7P60409 375 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 ACTR1AP61163 376 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 ASAH1Q13510 395 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 MXD4Q14582 209 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 SYPL1Q16563 259 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 C15orf32Q32M92 178 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 KRTAP27-1Q3LI81 207 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 GLYR1Q49A26 553 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 PAN3Q58A45 887 aaKnown RBP2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 CFAP157Q5JU67 520 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 ATAD3CQ5T2N8 411 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 RNLSQ5VYX0 342 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 WSCD1Q658N2 575 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 CGB2Q6NT52 195 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 CASC1Q6TDU7 716 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 VASH2Q86V25 355 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 CLEC4FQ8N1N0 589 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 FAM133AQ8N9E0 248 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 PELI1Q96FA3 418 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 VSIG2Q96IQ7 327 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 AMDHD1Q96NU7 426 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 FOXN4Q96NZ1 517 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 OR5M11Q96RB7 305 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 CYP2S1Q96SQ9 504 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 CRACR2AQ9BSW2 395 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 GON7Q9BXV9 100 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 GLT8D2Q9H1C3 349 aa2.94□□□□□ -1.94
HMGB1P17-201ENST00000403495 SIGLEC8Q9NYZ4 499 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms