RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 INTS12Q96CB8 462 aaKnown RBP13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 TLCD1Q96CP7 247 aa13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 OR7D2Q96RA2 312 aa13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 PIGMQ9H3S5 423 aa13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 PNPOQ9NVS9 261 aa13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 THAP1Q9NVV9 213 aa13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 CRIM1Q9NZV1 1036 aa13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 VDAC3Q9Y277 283 aa13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 TEP1Q99973 2627 aaKnown RBP13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 PRSS51A0A1B0GVH4 220 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 A0A1W2PNV4 684 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 FAM221AA4D161 298 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 DUXAA6NLW8 204 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 NPIPB9F8W1W9 429 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 SCN2BO60939 215 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 TNFSF13O75888 250 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 AK1P00568 194 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 SOAT1P35610 550 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 ZNF41P51814 821 aaPredicted RBP13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 AGFG1P52594 562 aaKnown RBP13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 SUCLG1P53597 346 aaKnown RBP13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 CLDN20P56880 219 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 RPS3AP61247 264 aaKnown RBP13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 MAGOHP61326 146 aaKnown RBP13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 CD226Q15762 336 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 PLPPR5Q32ZL2 321 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 KLHL26Q53HC5 615 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 ANXA8L1Q5VT79 327 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 PLXDC2Q6UX71 529 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 P4HA3Q7Z4N8 544 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 GGNQ86UU5 652 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 TMEM200AQ86VY9 491 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 ZZZ3Q8IYH5 903 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 CLECL1Q8IZS7 167 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 GATSQ8NAP1 163 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 CHDHQ8NE62 594 aaPredicted RBP13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 VPS37AQ8NEZ2 397 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 OR5M1Q8NGP8 315 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 ZBTB9Q96C00 473 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 TMBIM4Q9HC24 238 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 MED17Q9NVC6 651 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 PACSIN3Q9UKS6 424 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 PCDHGB4Q9UN71 923 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 KCNE3Q9Y6H6 103 aa13.4□□□□□ -0.26
SMIM11A-203ENST00000399299 HIVEP1P15822 2718 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 RNF103-CHMP3A0A140T963 221 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 TRPC5OSA6NMA1 111 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 SLCO1B7G3V0H7 640 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 H0YC42 278 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 H3BNH8 94 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 SDHDO14521 159 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 HDAC3O15379 428 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 SEC14L5O43304 696 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 GMFGO60234 142 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 CTAG2O75638 210 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 PSMA4P25789 261 aaKnown RBP13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 PCYT1AP49585 367 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 ATP12AP54707 1039 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 TPD52P55327 224 aaPredicted RBP13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 SUMO3P55854 103 aaPredicted RBP13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 SNTB1Q13884 538 aaKnown RBP13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 CASP8Q14790 479 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 ATG16L1Q676U5 607 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 C6orf120Q7Z4R8 191 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 SPATA19Q7Z5L4 167 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 OR5D16Q8NGK9 328 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 OR4A15Q8NGL6 344 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 B4GALNT2Q8NHY0 566 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 MIPOL1Q8TD10 442 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 SH3YL1Q96HL8 342 aaPredicted RBP13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 SLC35G5Q96KT7 338 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 RBM24Q9BX46 236 aaKnown RBP13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 PINK1Q9BXM7 581 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 SERHL2Q9H4I8 314 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 RNF122Q9H9V4 155 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 AIG1Q9NVV5 245 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 NKIRAS1Q9NYS0 192 aa13.39□□□□□ -0.27
SMIM11A-203ENST00000399299 MPDZO75970 2070 aa13.38□□□□□ -0.27
SMIM11A-203ENST00000399299 AKAP9Q99996 3911 aa13.38□□□□□ -0.27
SMIM11A-203ENST00000399299 TUBAL3A6NHL2 446 aa13.38□□□□□ -0.27
SMIM11A-203ENST00000399299 A8MXE2 369 aa13.38□□□□□ -0.27
SMIM11A-203ENST00000399299 SHISA8B8ZZ34 492 aa13.38□□□□□ -0.27
SMIM11A-203ENST00000399299 E9PBE3 544 aa13.38□□□□□ -0.27
SMIM11A-203ENST00000399299 MSTNO14793 375 aa13.38□□□□□ -0.27
SMIM11A-203ENST00000399299 GOSR1O95249 250 aa13.38□□□□□ -0.27
SMIM11A-203ENST00000399299 ALDOCP09972 364 aaKnown RBP13.38□□□□□ -0.27
SMIM11A-203ENST00000399299 LINGO3P0C6S8 592 aa13.38□□□□□ -0.27
SMIM11A-203ENST00000399299 FCGR2AP12318 317 aa13.38□□□□□ -0.27
SMIM11A-203ENST00000399299 MATN1P21941 496 aa13.38□□□□□ -0.27
SMIM11A-203ENST00000399299 UQCRC2P22695 453 aa13.38□□□□□ -0.27
SMIM11A-203ENST00000399299 EIF1P41567 113 aaKnown RBP13.38□□□□□ -0.27
SMIM11A-203ENST00000399299 RAC1P63000 192 aa13.38□□□□□ -0.27
SMIM11A-203ENST00000399299 PHC1P78364 1004 aa13.38□□□□□ -0.27
SMIM11A-203ENST00000399299 ZNF117Q03924 483 aa13.38□□□□□ -0.27
SMIM11A-203ENST00000399299 FGFBP1Q14512 234 aa13.38□□□□□ -0.27
SMIM11A-203ENST00000399299 DAZAP2Q15038 168 aaPredicted RBP13.38□□□□□ -0.27
SMIM11A-203ENST00000399299 SPANXN4Q5MJ08 99 aa13.38□□□□□ -0.27
SMIM11A-203ENST00000399299 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.38□□□□□ -0.27
SMIM11A-203ENST00000399299 WDR75Q8IWA0 830 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms