RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 PTGER4P35408 488 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ATP12AP54707 1039 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 CLDN18P56856 261 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 STX1BP61266 288 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 FUT5Q11128 374 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 GANABQ14697 944 aaKnown RBP12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ARHGAP11BQ3KRB8 267 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 COX20Q5RI15 118 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 CBLN3Q6UW01 205 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 C16orf62Q7Z3J2 963 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 FUNDC1Q8IVP5 155 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 TRIML2Q8N7C3 387 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 NAXEQ8NCW5 288 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 TNIP2Q8NFZ5 429 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 RFWD2Q8NHY2 731 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 PHOSPHO1Q8TCT1 267 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 DTNBP1Q96EV8 351 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 TUBA1CQ9BQE3 449 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 NPHS2Q9NP85 383 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 EXD2Q9NVH0 621 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ZNF337Q9Y3M9 751 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 CACNA1CQ13936 2221 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 FAM234BA2RU67 622 aa12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 OR2M5A3KFT3 312 aa12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 FAM90A27PA6NNH2 459 aa12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 H0Y3Z8 333 aa12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 H0YC42 278 aa12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 HCRTR2O43614 444 aa12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 STX11O75558 287 aa12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ZNF708P17019 499 aa12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 TPD52P55327 224 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ZNF117Q03924 483 aa12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 LRRC74AQ0VAA2 488 aa12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 NDUFAF6Q330K2 333 aa12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 GTDC1Q4AE62 458 aa12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 PDZK1Q5T2W1 519 aa12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 HEPHL1Q6MZM0 1159 aa12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 HMGN2P46Q86SG4 172 aa12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 LIX1LQ8IVB5 337 aa12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 UBQLNLQ8IYU4 475 aa12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ZNF527Q8NB42 609 aa12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 LILRB4Q8NHJ6 448 aa12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ASB5Q8WWX0 329 aa12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 AURKBQ96GD4 344 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ZNF350Q9GZX5 532 aa12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 HOXD1Q9GZZ0 328 aa12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 CCDC167Q9P0B6 97 aa12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 CARD8Q9Y2G2 431 aa12.74□□□□□ -0.37
HLA-DQB1-202ENST00000399079 H3BML4 177 aa12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 TNFRSF21O75509 655 aa12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 UGT2B17O75795 530 aa12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ANP32DO95626 131 aa12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 SNRPB2P08579 225 aaKnown RBP12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 MSX1P28360 303 aa12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 MRPL19P49406 292 aaKnown RBP12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 KHKP50053 298 aa12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 SUCLG1P53597 346 aaKnown RBP12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 CLDN15P56746 228 aa12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 HSP90B2PQ58FF3 399 aa12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 C6orf10Q5SRN2 563 aa12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ATAD3BQ5T9A4 648 aa12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 NSUN5P2Q63ZY6 315 aa12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 SLC2A7Q6PXP3 512 aa12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 MISPQ8IVT2 679 aa12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 B4GALNT2Q8NHY0 566 aa12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ZPLD1Q8TCW7 415 aa12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ZFP90Q8TF47 636 aa12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 GTF2H4Q92759 462 aa12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ROPN1LQ96C74 230 aa12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ZG16BQ96DA0 208 aa12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ARSGQ96EG1 525 aa12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ITCHQ96J02 903 aa12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 RMND5AQ9H871 391 aa12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 DTNAQ9Y4J8 743 aa12.73□□□□□ -0.37
HLA-DQB1-202ENST00000399079 A0A0G2JND7 137 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 AGR2O95994 175 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 AK1P00568 194 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 NCF2P19878 526 aaPredicted RBP12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 POU3F2P20265 443 aaPredicted RBP12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 MVDP53602 400 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 CLDN20P56880 219 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 GUCY1A3Q02108 690 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 SF3A3Q12874 501 aaKnown RBP eCLIP12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 RCAN2Q14206 197 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 MAPK14Q16539 360 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 SYPL1Q16563 259 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 TMEM44Q2T9K0 475 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 GPAT3Q53EU6 434 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 RIPPLY2Q5TAB7 128 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 TYW3Q6IPR3 259 aaKnown RBP12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 BLOC1S3Q6QNY0 202 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 FRRS1Q6ZNA5 592 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 MTERF4Q7Z6M4 381 aaKnown RBP12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ADGRE4PQ86SQ3 457 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 LACC1Q8IV20 430 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 SMPDL3BQ92485 455 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ZNF524Q96C55 264 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 PIGQQ9BRB3 760 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 NMUR2Q9GZQ4 415 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 QRSL1Q9H0R6 528 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms