RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 FBXO42Q6P3S6 717 aa11.67□□□□□ -0.54
SOCS6-201ENST00000397942 BCDIN3DQ7Z5W3 292 aaKnown RBP11.67□□□□□ -0.54
SOCS6-201ENST00000397942 Q8N9G6 341 aaPredicted RBP11.67□□□□□ -0.54
SOCS6-201ENST00000397942 OR6C4Q8NGE1 309 aa11.67□□□□□ -0.54
SOCS6-201ENST00000397942 ZNF471Q9BX82 626 aaPredicted RBP11.67□□□□□ -0.54
SOCS6-201ENST00000397942 SIDT1Q9NXL6 827 aaKnown RBP11.67□□□□□ -0.54
SOCS6-201ENST00000397942 ADAM29Q9UKF5 820 aa11.67□□□□□ -0.54
SOCS6-201ENST00000397942 TCRBV21S2A2A0A5A6 115 aa11.67□□□□□ -0.54
SOCS6-201ENST00000397942 A8MVJ9 347 aa11.67□□□□□ -0.54
SOCS6-201ENST00000397942 NPC1O15118 1278 aa11.67□□□□□ -0.54
SOCS6-201ENST00000397942 LILRB3O75022 631 aa11.67□□□□□ -0.54
SOCS6-201ENST00000397942 PRH1P02810 166 aa11.67□□□□□ -0.54
SOCS6-201ENST00000397942 MAS1P04201 325 aa11.67□□□□□ -0.54
SOCS6-201ENST00000397942 HOXD12P35452 270 aa11.67□□□□□ -0.54
SOCS6-201ENST00000397942 FRKP42685 505 aaPredicted RBP11.67□□□□□ -0.54
SOCS6-201ENST00000397942 PRKCDQ05655 676 aa11.67□□□□□ -0.54
SOCS6-201ENST00000397942 EXOSC7Q15024 291 aaKnown RBP11.67□□□□□ -0.54
SOCS6-201ENST00000397942 HENMT1Q5T8I9 393 aaKnown RBP11.67□□□□□ -0.54
SOCS6-201ENST00000397942 FAM111BQ6SJ93 734 aa11.67□□□□□ -0.54
SOCS6-201ENST00000397942 FTMTQ8N4E7 242 aa11.67□□□□□ -0.54
SOCS6-201ENST00000397942 ZNF559Q9BR84 538 aa11.67□□□□□ -0.54
SOCS6-201ENST00000397942 PTGES2Q9H7Z7 377 aa11.67□□□□□ -0.54
SOCS6-201ENST00000397942 FBXL3Q9UKT7 428 aa11.67□□□□□ -0.54
SOCS6-201ENST00000397942 CCDC88CQ9P219 2028 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 COL16A1Q07092 1604 aaPredicted RBP11.66□□□□□ -0.54
SOCS6-201ENST00000397942 HCKP08631 526 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 ACP2P11117 423 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 PITPNBP48739 271 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 SERPINA12Q8IW75 414 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 CORINQ9Y5Q5 1042 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 A3GALT2U3KPV4 340 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 CCDC85CA6NKD9 419 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 CDC40O60508 579 aaKnown RBP eCLIP11.66□□□□□ -0.54
SOCS6-201ENST00000397942 F3P13726 295 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 SLC1A3P43003 542 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 SOX9P48436 509 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 DHPSP49366 369 aaPredicted RBP11.66□□□□□ -0.54
SOCS6-201ENST00000397942 ART1P52961 327 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 RAB30Q15771 203 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 HES5Q5TA89 166 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 ANKRD54Q6NXT1 300 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 LEG1Q6P5S2 330 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 NOXA1Q86UR1 476 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 RBM45Q8IUH3 476 aaKnown RBP11.66□□□□□ -0.54
SOCS6-201ENST00000397942 LAX1Q8IWV1 398 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 POGLUT1Q8NBL1 392 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 OR5J2Q8NH18 312 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 TMEM163Q8TC26 289 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 SAMD11Q96NU1 681 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 SERINC2Q96SA4 455 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 TPSD1Q9BZJ3 242 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 NTN4Q9HB63 628 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 C12orf4Q9NQ89 552 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 SPATA6Q9NWH7 488 aaPredicted RBP11.66□□□□□ -0.54
SOCS6-201ENST00000397942 PCDHGA6Q9Y5G7 932 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 TRAV18A0A075B6X5 111 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 LOC102723532A0A0G2JNH3 316 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 C9J4A7 227 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 NR2C1P13056 603 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 HTR2BP41595 481 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 C18orf63Q68DL7 685 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 KCTD9Q7L273 389 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 SDR9C7Q8NEX9 313 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 ZNF419Q96HQ0 510 aaPredicted RBP11.66□□□□□ -0.54
SOCS6-201ENST00000397942 TIMM29Q9BSF4 260 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 IL21Q9HBE4 155 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 ACER3Q9NUN7 267 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 CLEC2DQ9UHP7 191 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 PLCL2Q9UPR0 1127 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 TCRBV5S2A0A599 114 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 PLGP00747 810 aaPredicted RBP11.66□□□□□ -0.54
SOCS6-201ENST00000397942 PROS1P07225 676 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 PGCP20142 388 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 GP2P55259 537 aaKnown RBP11.66□□□□□ -0.54
SOCS6-201ENST00000397942 GRK1Q15835 563 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 OR5W2Q8NH69 310 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 METTL8Q9H825 291 aaKnown RBP11.66□□□□□ -0.54
SOCS6-201ENST00000397942 PCDHGB2Q9Y5G2 931 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 TRBV5-4A0A0C4DH59 114 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 CPNE6O95741 557 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 ENDOUP21128 410 aaKnown RBP11.66□□□□□ -0.54
SOCS6-201ENST00000397942 IRF4Q15306 451 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 MAPK14Q16539 360 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 NKG7Q16617 165 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 C11orf91Q3C1V1 193 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 RNASE10Q5GAN6 216 aaKnown RBP11.66□□□□□ -0.54
SOCS6-201ENST00000397942 LRRN1Q6UXK5 716 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 TMEM179BQ7Z7N9 219 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 ZNF440Q8IYI8 595 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 SPAG16Q8N0X2 631 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 BCL7CQ8WUZ0 217 aaPredicted RBP11.66□□□□□ -0.54
SOCS6-201ENST00000397942 DEDD2Q8WXF8 326 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 TM4SF18Q96CE8 201 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 MSANTD3Q96H12 275 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 THAP7Q9BT49 309 aaPredicted RBP11.66□□□□□ -0.54
SOCS6-201ENST00000397942 ATG5Q9H1Y0 275 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 TM7SF3Q9NS93 570 aa11.66□□□□□ -0.54
SOCS6-201ENST00000397942 METTL15A6NJ78 407 aa11.65□□□□□ -0.54
SOCS6-201ENST00000397942 CENPBD1B2RD01 187 aa11.65□□□□□ -0.54
SOCS6-201ENST00000397942 TMX2-CTNND1H3BSU7 103 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms