RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 TAGAPQ8N103 731 aa17.91■□□□□ 0.46
PDLIM2-205ENST00000397761 GALNT4Q8N4A0 578 aa17.91■□□□□ 0.46
PDLIM2-205ENST00000397761 SLC15A4Q8N697 577 aa17.91■□□□□ 0.46
PDLIM2-205ENST00000397761 ZNF527Q8NB42 609 aa17.91■□□□□ 0.46
PDLIM2-205ENST00000397761 CNOT9Q92600 299 aaKnown RBP17.91■□□□□ 0.46
PDLIM2-205ENST00000397761 SDCCAG3Q96C92 435 aa17.91■□□□□ 0.46
PDLIM2-205ENST00000397761 BARD1Q99728 777 aaKnown RBP17.91■□□□□ 0.46
PDLIM2-205ENST00000397761 LIN28AQ9H9Z2 209 aaKnown RBP17.91■□□□□ 0.46
PDLIM2-205ENST00000397761 DNAJB12Q9NXW2 375 aaKnown RBP17.91■□□□□ 0.46
PDLIM2-205ENST00000397761 FLRT3Q9NZU0 649 aa17.91■□□□□ 0.46
PDLIM2-205ENST00000397761 MED13Q9UHV7 2174 aa17.9■□□□□ 0.46
PDLIM2-205ENST00000397761 A0A1W2PQD3 144 aa17.9■□□□□ 0.46
PDLIM2-205ENST00000397761 A0A1W2PRQ8 180 aa17.9■□□□□ 0.46
PDLIM2-205ENST00000397761 DCDC2BA2VCK2 349 aa17.9■□□□□ 0.46
PDLIM2-205ENST00000397761 TNFRSF11BO00300 401 aa17.9■□□□□ 0.46
PDLIM2-205ENST00000397761 ICAM2P13598 275 aa17.9■□□□□ 0.46
PDLIM2-205ENST00000397761 FUT4P22083 530 aa17.9■□□□□ 0.46
PDLIM2-205ENST00000397761 KRT20P35900 424 aa17.9■□□□□ 0.46
PDLIM2-205ENST00000397761 HSPA13P48723 471 aa17.9■□□□□ 0.46
PDLIM2-205ENST00000397761 ARHGDIAP52565 204 aa17.9■□□□□ 0.46
PDLIM2-205ENST00000397761 SMIM11AP58511 58 aa17.9■□□□□ 0.46
PDLIM2-205ENST00000397761 PIN1Q13526 163 aaPredicted RBP17.9■□□□□ 0.46
PDLIM2-205ENST00000397761 DGCR6Q14129 220 aa17.9■□□□□ 0.46
PDLIM2-205ENST00000397761 CMPK2Q5EBM0 449 aa17.9■□□□□ 0.46
PDLIM2-205ENST00000397761 COLEC12Q5KU26 742 aa17.9■□□□□ 0.46
PDLIM2-205ENST00000397761 C16orf47Q6ZP98 133 aaPredicted RBP17.9■□□□□ 0.46
PDLIM2-205ENST00000397761 RNF138Q8WVD3 245 aa17.9■□□□□ 0.46
PDLIM2-205ENST00000397761 RBM4BQ9BQ04 359 aaKnown RBP17.9■□□□□ 0.46
PDLIM2-205ENST00000397761 RBM4Q9BWF3 364 aaKnown RBP17.9■□□□□ 0.46
PDLIM2-205ENST00000397761 MAN2C1Q9NTJ4 1040 aa17.9■□□□□ 0.46
PDLIM2-205ENST00000397761 P4HTMQ9NXG6 502 aa17.9■□□□□ 0.46
PDLIM2-205ENST00000397761 TESQ9UGI8 421 aaKnown RBP17.9■□□□□ 0.46
PDLIM2-205ENST00000397761 SLC35A3Q9Y2D2 325 aa17.9■□□□□ 0.46
PDLIM2-205ENST00000397761 ARRDC5A6NEK1 342 aa17.89■□□□□ 0.45
PDLIM2-205ENST00000397761 FADS1O60427 444 aa17.89■□□□□ 0.45
PDLIM2-205ENST00000397761 ICOSLGO75144 302 aa17.89■□□□□ 0.45
PDLIM2-205ENST00000397761 UGT2B11O75310 529 aa17.89■□□□□ 0.45
PDLIM2-205ENST00000397761 GADD45GO95257 159 aa17.89■□□□□ 0.45
PDLIM2-205ENST00000397761 H1F0P07305 194 aaKnown RBP17.89■□□□□ 0.45
PDLIM2-205ENST00000397761 CELA2AP08217 269 aa17.89■□□□□ 0.45
PDLIM2-205ENST00000397761 CHAF1BQ13112 559 aa17.89■□□□□ 0.45
PDLIM2-205ENST00000397761 EFR3AQ14156 821 aa17.89■□□□□ 0.45
PDLIM2-205ENST00000397761 GANABQ14697 944 aaKnown RBP17.89■□□□□ 0.45
PDLIM2-205ENST00000397761 OTUD3Q5T2D3 398 aaPredicted RBP17.89■□□□□ 0.45
PDLIM2-205ENST00000397761 FAHD1Q6P587 224 aa17.89■□□□□ 0.45
PDLIM2-205ENST00000397761 APOOLQ6UXV4 268 aa17.89■□□□□ 0.45
PDLIM2-205ENST00000397761 RANBP3LQ86VV4 465 aaPredicted RBP17.89■□□□□ 0.45
PDLIM2-205ENST00000397761 RAB43Q86YS6 212 aa17.89■□□□□ 0.45
PDLIM2-205ENST00000397761 MCHR1Q99705 422 aa17.89■□□□□ 0.45
PDLIM2-205ENST00000397761 ANKRD19PQ9H560 264 aa17.89■□□□□ 0.45
PDLIM2-205ENST00000397761 ZNF160Q9HCG1 818 aa17.89■□□□□ 0.45
PDLIM2-205ENST00000397761 IL17BQ9UHF5 180 aa17.89■□□□□ 0.45
PDLIM2-205ENST00000397761 FBXL4Q9UKA2 621 aa17.89■□□□□ 0.45
PDLIM2-205ENST00000397761 MPDZO75970 2070 aa17.89■□□□□ 0.45
PDLIM2-205ENST00000397761 ALG1L2C9J202 215 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 WWP2O00308 870 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 SCDO00767 359 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 AP3D1O14617 1153 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 HS6ST1O60243 411 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 OR5F1O95221 314 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 FBXO45P0C2W1 286 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 LIPCP11150 499 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 PRG2P13727 222 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 ACAA2P42765 397 aaKnown RBP17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 MICAQ29983 383 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 EXOC3L2Q2M3D2 409 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 NHSL2Q5HYW2 709 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 IL22RA1Q8N6P7 574 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 ZNF614Q8N883 585 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 POGLUT1Q8NBL1 392 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 THAP3Q8WTV1 239 aaPredicted RBP17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 RDH12Q96NR8 316 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 IP6K3Q96PC2 410 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 EXOSC3Q9NQT5 275 aaKnown RBP17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 PDP1Q9P0J1 537 aaPredicted RBP17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 RHCGQ9UBD6 479 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 ADAM10O14672 748 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 CSTAP01040 98 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 ENDOUP21128 410 aaKnown RBP17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 PRKACGP22612 351 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 ELAVL4P26378 380 aaKnown RBP17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 HTR2AP28223 471 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 HOXC5Q00444 222 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 Q0VFX4 171 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 ENTPD8Q5MY95 495 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 KDM4DQ6B0I6 523 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 DESI1Q6ICB0 168 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 ZNF770Q6IQ21 691 aaPredicted RBP17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 H3F3CQ6NXT2 135 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 ZNF440Q8IYI8 595 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 OR52J3Q8NH60 311 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 SLC22A8Q8TCC7 542 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 MAGEE2Q8TD90 523 aaPredicted RBP17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 GIPC3Q8TF64 312 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 TTC9Q92623 222 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 HGDQ93099 445 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 ALPK1Q96QP1 1244 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 RASL10BQ96S79 203 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 FNDC11Q9BVV2 318 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 PRR14Q9BWN1 585 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms