RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 CHRM4P08173 479 aa17.9■□□□□ 0.46
PDLIM2-204ENST00000397760 CCNYL3P0C7X3 344 aa17.9■□□□□ 0.46
PDLIM2-204ENST00000397760 PSMB9P28065 219 aa17.9■□□□□ 0.46
PDLIM2-204ENST00000397760 IDUAP35475 653 aa17.9■□□□□ 0.46
PDLIM2-204ENST00000397760 UGT2B10P36537 528 aa17.9■□□□□ 0.46
PDLIM2-204ENST00000397760 MAP3K8P41279 467 aa17.9■□□□□ 0.46
PDLIM2-204ENST00000397760 MAP2K4P45985 399 aa17.9■□□□□ 0.46
PDLIM2-204ENST00000397760 ITGADQ13349 1161 aa17.9■□□□□ 0.46
PDLIM2-204ENST00000397760 OR4C15Q8NGM1 316 aa17.9■□□□□ 0.46
PDLIM2-204ENST00000397760 SLC2A12Q8TD20 617 aa17.9■□□□□ 0.46
PDLIM2-204ENST00000397760 APH1BQ8WW43 257 aa17.9■□□□□ 0.46
PDLIM2-204ENST00000397760 SLC38A4Q969I6 547 aa17.9■□□□□ 0.46
PDLIM2-204ENST00000397760 TAMM41Q96BW9 452 aa17.9■□□□□ 0.46
PDLIM2-204ENST00000397760 TRNT1Q96Q11 434 aaKnown RBP17.9■□□□□ 0.46
PDLIM2-204ENST00000397760 TREX2Q9BQ50 279 aaPredicted RBP17.9■□□□□ 0.46
PDLIM2-204ENST00000397760 ITPAQ9BY32 194 aa17.9■□□□□ 0.46
PDLIM2-204ENST00000397760 SPRY4Q9C004 299 aa17.9■□□□□ 0.46
PDLIM2-204ENST00000397760 FKBP14Q9NWM8 211 aa17.9■□□□□ 0.46
PDLIM2-204ENST00000397760 FOXJ2Q9P0K8 574 aa17.9■□□□□ 0.46
PDLIM2-204ENST00000397760 PSORS1C1Q9UIG5 152 aa17.9■□□□□ 0.46
PDLIM2-204ENST00000397760 DDAH2O95865 285 aa17.89■□□□□ 0.45
PDLIM2-204ENST00000397760 GABRA3P34903 492 aa17.89■□□□□ 0.45
PDLIM2-204ENST00000397760 HMGA2P52926 109 aa17.89■□□□□ 0.45
PDLIM2-204ENST00000397760 NCF4Q15080 339 aa17.89■□□□□ 0.45
PDLIM2-204ENST00000397760 ZNHIT3Q15649 155 aaPredicted RBP17.89■□□□□ 0.45
PDLIM2-204ENST00000397760 HEPHL1Q6MZM0 1159 aa17.89■□□□□ 0.45
PDLIM2-204ENST00000397760 OLIG3Q7RTU3 272 aa17.89■□□□□ 0.45
PDLIM2-204ENST00000397760 TIPARPQ7Z3E1 657 aaKnown RBP17.89■□□□□ 0.45
PDLIM2-204ENST00000397760 TSEN54Q7Z6J9 526 aaKnown RBP17.89■□□□□ 0.45
PDLIM2-204ENST00000397760 ZNF321PQ8N8H1 164 aa17.89■□□□□ 0.45
PDLIM2-204ENST00000397760 OR6Q1Q8NGQ2 317 aa17.89■□□□□ 0.45
PDLIM2-204ENST00000397760 C16orf52Q8NHV5 167 aa17.89■□□□□ 0.45
PDLIM2-204ENST00000397760 BBS10Q8TAM1 723 aa17.89■□□□□ 0.45
PDLIM2-204ENST00000397760 GPR151Q8TDV0 419 aa17.89■□□□□ 0.45
PDLIM2-204ENST00000397760 HOXB13Q92826 284 aaPredicted RBP17.89■□□□□ 0.45
PDLIM2-204ENST00000397760 ITPKCQ96DU7 683 aa17.89■□□□□ 0.45
PDLIM2-204ENST00000397760 ART5Q96L15 291 aa17.89■□□□□ 0.45
PDLIM2-204ENST00000397760 VSTM2LQ96N03 204 aa17.89■□□□□ 0.45
PDLIM2-204ENST00000397760 LMF2Q9BU23 707 aaKnown RBP17.89■□□□□ 0.45
PDLIM2-204ENST00000397760 PRODH2Q9UF12 536 aa17.89■□□□□ 0.45
PDLIM2-204ENST00000397760 DTX4Q9Y2E6 619 aa17.89■□□□□ 0.45
PDLIM2-204ENST00000397760 A3GALT2U3KPV4 340 aa17.89■□□□□ 0.45
PDLIM2-204ENST00000397760 NUP210LQ5VU65 1888 aa17.89■□□□□ 0.45
PDLIM2-204ENST00000397760 IGHV3-20A0A0C4DH32 117 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 ARRDC5A6NEK1 342 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 PDE9AO76083 593 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 NKX2-2O95096 273 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 TNFSF15O95150 251 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 SLC34A2O95436 690 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 FADS2O95864 444 aaKnown RBP17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 CYC1P08574 325 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 EPHA2P29317 976 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 OXA1LQ15070 435 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 ADCK1Q86TW2 530 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 COX18Q8N8Q8 333 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 RHOXF1Q8NHV9 184 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 SPPL2AQ8TCT8 520 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 ZNF721Q8TF20 911 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 SNRNP27Q8WVK2 155 aaKnown RBP17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 GEMIN6Q8WXD5 167 aaKnown RBP17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 PIK3R3Q92569 461 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 LGALS12Q96DT0 336 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 DACH2Q96NX9 599 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 ZNF607Q96SK3 696 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 BCL2L10Q9HD36 194 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 CALML5Q9NZT1 146 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 RNF6Q9Y252 685 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 A0A0G2JPF8 293 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 HNRNPCL2B2RXH8 293 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 HNRNPCL3B7ZW38 293 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 SOX30O94993 753 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 NADKO95544 446 aaPredicted RBP17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 IGKV3-11P04433 115 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 HNRNPCL4P0DMR1 293 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 IMPDH2P12268 514 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 TGFBR2P37173 567 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 SLC37A1P57057 533 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 PSG6Q00889 435 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 MICAQ29983 383 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 TRIM16LQ309B1 348 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 ARHGAP11BQ3KRB8 267 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 FAM69BQ5VUD6 431 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 PRAMEF8Q5VWM4 474 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 PRAMEF7Q5VXH5 474 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 CCDC81Q6ZN84 652 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 MARCH9Q86YJ5 346 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 ARMC8Q8IUR7 673 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 MORN4Q8NDC4 146 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 OR10G2Q8NGC3 310 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 FEVQ99581 238 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 MESP1Q9BRJ9 268 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 COPS4Q9BT78 406 aa17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 PTRH2Q9Y3E5 179 aaKnown RBP17.88■□□□□ 0.45
PDLIM2-204ENST00000397760 CLCA1A8K7I4 914 aa17.87■□□□□ 0.45
PDLIM2-204ENST00000397760 SLC30A4O14863 429 aa17.87■□□□□ 0.45
PDLIM2-204ENST00000397760 BRINP1O60477 761 aa17.87■□□□□ 0.45
PDLIM2-204ENST00000397760 KLF7O75840 302 aaPredicted RBP17.87■□□□□ 0.45
PDLIM2-204ENST00000397760 NR4A1P22736 598 aa17.87■□□□□ 0.45
PDLIM2-204ENST00000397760 SMN1Q16637 294 aaKnown RBP17.87■□□□□ 0.45
PDLIM2-204ENST00000397760 TMEM205Q6UW68 189 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms