RNA–Protein interactions for RNA: ENST00000396856.5

GAPDH-202, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-202ENST00000396856 LINC01560Q8TB33 94 aa10.88□□□□□ -0.67
GAPDH-202ENST00000396856 ACTRT2Q8TDY3 377 aa10.88□□□□□ -0.67
GAPDH-202ENST00000396856 JADE3Q92613 823 aa10.88□□□□□ -0.67
GAPDH-202ENST00000396856 ZBTB8AQ96BR9 441 aa10.88□□□□□ -0.67
GAPDH-202ENST00000396856 MBD6Q96DN6 1003 aa10.88□□□□□ -0.67
GAPDH-202ENST00000396856 FAM120BQ96EK7 910 aaKnown RBP10.88□□□□□ -0.67
GAPDH-202ENST00000396856 STACQ99469 402 aa10.88□□□□□ -0.67
GAPDH-202ENST00000396856 PINK1Q9BXM7 581 aa10.88□□□□□ -0.67
GAPDH-202ENST00000396856 NEUROD4Q9HD90 331 aa10.88□□□□□ -0.67
GAPDH-202ENST00000396856 UBQLN4Q9NRR5 601 aa10.88□□□□□ -0.67
GAPDH-202ENST00000396856 DUSP22Q9NRW4 184 aa10.88□□□□□ -0.67
GAPDH-202ENST00000396856 ZCCHC3Q9NUD5 404 aaKnown RBP10.88□□□□□ -0.67
GAPDH-202ENST00000396856 PAQR5Q9NXK6 330 aaPredicted RBP10.88□□□□□ -0.67
GAPDH-202ENST00000396856 ZANQ9Y493 2812 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 DOCK7Q96N67 2140 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 A0A1W2PQD3 144 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 C7orf72A4D263 438 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 SH3D21A4FU49 640 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 SCDO00767 359 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 CASKO14936 926 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 TYROBPO43914 113 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 SMNDC1O75940 238 aaKnown RBP eCLIP10.87□□□□□ -0.673e-6■■■■□ 26.7
GAPDH-202ENST00000396856 SNUPNO95149 360 aaKnown RBP10.87□□□□□ -0.67
GAPDH-202ENST00000396856 KRT16P08779 473 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 HOXC12P31275 282 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 CPOXP36551 454 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 ETV4P43268 484 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 ZNF41P51814 821 aaPredicted RBP10.87□□□□□ -0.67
GAPDH-202ENST00000396856 CLDN15P56746 228 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 CLDN20P56880 219 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 MAGOHP61326 146 aaKnown RBP10.87□□□□□ -0.67
GAPDH-202ENST00000396856 POU6F2P78424 691 aaPredicted RBP10.87□□□□□ -0.67
GAPDH-202ENST00000396856 MAD2L1Q13257 205 aaPredicted RBP10.87□□□□□ -0.67
GAPDH-202ENST00000396856 PON3Q15166 354 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 EXOSC6Q5RKV6 272 aaKnown RBP10.87□□□□□ -0.67
GAPDH-202ENST00000396856 CPTPQ5TA50 214 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 FIGNL1Q6PIW4 674 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 CAMKMTQ7Z624 323 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 NUDCD3Q8IVD9 361 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 METTL25Q8N6Q8 603 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 CNEP1R1Q8N9A8 125 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 ZNF527Q8NB42 609 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 OR7A2PQ8NGA2 310 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 OR56A1Q8NGH5 318 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 PPP1R14CQ8TAE6 165 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 FBXO30Q8TB52 745 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 OR5P2Q8WZ92 322 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 SMPDL3BQ92485 455 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 FIG4Q92562 907 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 TUBGCP3Q96CW5 907 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 STARD4Q96DR4 205 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 C18orf12Q96KH6 178 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 BTBD2Q9BX70 525 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 PIGUQ9H490 435 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 RNF122Q9H9V4 155 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 SIRT3Q9NTG7 399 aaPredicted RBP10.87□□□□□ -0.67
GAPDH-202ENST00000396856 ZDHHC2Q9UIJ5 367 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 EIF3LQ9Y262 564 aaKnown RBP10.87□□□□□ -0.67
GAPDH-202ENST00000396856 VDAC3Q9Y277 283 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 SNX8Q9Y5X2 465 aa10.87□□□□□ -0.67
GAPDH-202ENST00000396856 H0YC42 278 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 SKAP2O75563 359 aaPredicted RBP10.86□□□□□ -0.67
GAPDH-202ENST00000396856 HMGN2P05204 90 aaKnown RBP10.86□□□□□ -0.67
GAPDH-202ENST00000396856 INHBBP09529 407 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 LAMP1P11279 417 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 EFNA1P20827 205 aaPredicted RBP10.86□□□□□ -0.67
GAPDH-202ENST00000396856 ATP6V1C1P21283 382 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 CCT3P49368 545 aaKnown RBP10.86□□□□□ -0.67
GAPDH-202ENST00000396856 SUCLG1P53597 346 aaKnown RBP10.86□□□□□ -0.67
GAPDH-202ENST00000396856 TPD52P55327 224 aaPredicted RBP10.86□□□□□ -0.67
GAPDH-202ENST00000396856 LASP1Q14847 261 aaKnown RBP10.86□□□□□ -0.67
GAPDH-202ENST00000396856 PTGR1Q14914 329 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 SGCBQ16585 318 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 SMU1Q2TAY7 513 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 IL23RQ5VWK5 629 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 CDC73Q6P1J9 531 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 BHLHB9Q6PI77 547 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 PAMR1Q6UXH9 720 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 KRTAP1-3Q8IUG1 177 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 WDR75Q8IWA0 830 aaKnown RBP10.86□□□□□ -0.67
GAPDH-202ENST00000396856 KIRREL3Q8IZU9 778 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 GTPBP8Q8N3Z3 284 aaPredicted RBP10.86□□□□□ -0.67
GAPDH-202ENST00000396856 OR5M1Q8NGP8 315 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 FNDC9Q8TBE3 224 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 SFXN5Q8TD22 340 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 MOAP1Q96BY2 351 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 COQ8BQ96D53 544 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 CHMP6Q96FZ7 201 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 C16orf58Q96GQ5 468 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 ZNF845Q96IR2 970 aaPredicted RBP10.86□□□□□ -0.67
GAPDH-202ENST00000396856 C3orf30Q96M34 536 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 SLC39A3Q9BRY0 314 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 C1orf50Q9BV19 199 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 ACTRT3Q9BYD9 372 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 BHLHE41Q9C0J9 482 aaPredicted RBP10.86□□□□□ -0.67
GAPDH-202ENST00000396856 HOXD1Q9GZZ0 328 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 ELOVL5Q9NYP7 299 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 GIMAP2Q9UG22 337 aa10.86□□□□□ -0.67
GAPDH-202ENST00000396856 FAF1Q9UNN5 650 aaPredicted RBP10.86□□□□□ -0.67
GAPDH-202ENST00000396856 PLEKHA6Q9Y2H5 1048 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms