RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 GNALP38405 381 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 KIR3DL1P43629 444 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 SNRPGP62308 76 aaKnown RBP11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 RIPPLY1Q0D2K3 151 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 LAMTOR4Q0VGL1 99 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 TDGQ13569 410 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 ELAVL1Q15717 326 aaKnown RBP11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 CDNFQ49AH0 187 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 XKR6Q5GH73 641 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 RNF165Q6ZSG1 346 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 TMEM200AQ86VY9 491 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 KLHDC8BQ8IXV7 354 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 SPICQ8N5J4 248 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 OR4F15Q8NGB8 312 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 PPP1R16AQ96I34 528 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 APOLD1Q96LR9 279 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 HRASLSQ9HDD0 168 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 SIRT7Q9NRC8 400 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 A0A1B0GUH1 482 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 SULT2B1O00204 365 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 EREGO14944 169 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 EIF4E2O60573 245 aaKnown RBP11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 ICAM1P05362 532 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 LIMS3P0CW19 117 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 LIMS4P0CW20 117 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 IFNGR1P15260 489 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 GNSP15586 552 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 GABRR2P28476 465 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 STAT5AP42229 794 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 CRATP43155 626 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 CCR9P51686 369 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 RAG2P55895 527 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 STXBP1P61764 594 aaKnown RBP11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 NAE1Q13564 534 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 RPE65Q16518 533 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 LINC00303Q3SY05 128 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 ETFRF1Q6IPR1 90 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 MRNIPQ6NTE8 343 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 CD200R1LQ6Q8B3 271 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 UNQ6126/PRO20091Q6UXV3 157 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 CD99L2Q8TCZ2 262 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 GPBAR1Q8TDU6 330 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 ORAI1Q96D31 301 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 BSCL2Q96G97 398 aaPredicted RBP11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 ZBED3Q96IU2 234 aaPredicted RBP11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 LCORQ96JN0 433 aaPredicted RBP11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 CNTNAP3BQ96NU0 1288 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 EGFL8Q99944 293 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 ZNF559Q9BR84 538 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 FAIM2Q9BWQ8 316 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 SLC39A8Q9C0K1 460 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 RPS10P5Q9NQ39 176 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 THSD1Q9NS62 852 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 POT1Q9NUX5 634 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 ZNF230Q9UIE0 474 aaPredicted RBP11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 ZDHHC8Q9ULC8 765 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 XIRP1Q702N8 1843 aaKnown RBP11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 LRRN3E7EW58 273 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 F5H5P2 479 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 TNFRSF10BO14763 440 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 MAFKO60675 156 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 HEXAP06865 529 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 HNRNPKP61978 463 aaKnown RBP eCLIP11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 GLT8D1Q68CQ7 371 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 HBMQ6B0K9 141 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 LINGO2Q7L985 606 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 LRRTM4Q86VH4 590 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 FOXRED2Q8IWF2 684 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 OR2L5Q8NG80 312 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 OR8J1Q8NGP2 316 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 TRAPPC12Q8WVT3 735 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 ZNF582Q96NG8 517 aaPredicted RBP11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 TMEM121BQ9BXQ6 578 aaPredicted RBP11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 LRRN3Q9H3W5 708 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 PRM3Q9NNZ6 103 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 MRPS30Q9NP92 439 aaKnown RBP11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 TMEM138Q9NPI0 162 aa11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 MBD1Q9UIS9 605 aaPredicted RBP11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 CARHSP1Q9Y2V2 147 aaKnown RBP11.72□□□□□ -0.53
SLC28A1-203ENST00000394573 SCN1AP35498 2009 aa11.71□□□□□ -0.53
SLC28A1-203ENST00000394573 GPR39O43194 453 aa11.71□□□□□ -0.53
SLC28A1-203ENST00000394573 LDB2O43679 373 aa11.71□□□□□ -0.53
SLC28A1-203ENST00000394573 IQCF3P0C7M6 154 aa11.71□□□□□ -0.53
SLC28A1-203ENST00000394573 UBBP0CG47 229 aa11.71□□□□□ -0.53
SLC28A1-203ENST00000394573 GPX2P18283 190 aa11.71□□□□□ -0.53
SLC28A1-203ENST00000394573 SDC1P18827 310 aa11.71□□□□□ -0.53
SLC28A1-203ENST00000394573 S100A2P29034 98 aa11.71□□□□□ -0.53
SLC28A1-203ENST00000394573 ART1P52961 327 aa11.71□□□□□ -0.53
SLC28A1-203ENST00000394573 CDH4P55283 916 aa11.71□□□□□ -0.53
SLC28A1-203ENST00000394573 AP1S1P61966 158 aa11.71□□□□□ -0.53
SLC28A1-203ENST00000394573 RPS27AP62979 156 aaKnown RBP11.71□□□□□ -0.53
SLC28A1-203ENST00000394573 UBA52P62987 128 aaKnown RBP11.71□□□□□ -0.53
SLC28A1-203ENST00000394573 LSM11P83369 360 aaKnown RBP eCLIP11.71□□□□□ -0.53
SLC28A1-203ENST00000394573 TNFRSF9Q07011 255 aa11.71□□□□□ -0.53
SLC28A1-203ENST00000394573 SREBF2Q12772 1141 aa11.71□□□□□ -0.53
SLC28A1-203ENST00000394573 SIRPB2Q5JXA9 342 aa11.71□□□□□ -0.53
SLC28A1-203ENST00000394573 SFXN4Q6P4A7 337 aa11.71□□□□□ -0.53
SLC28A1-203ENST00000394573 UQCC3Q6UW78 93 aa11.71□□□□□ -0.53
SLC28A1-203ENST00000394573 ZNF546Q86UE3 836 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms