RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 QRSL1Q9H0R6 528 aaKnown RBP6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 ACBD3Q9H3P7 528 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 TMEM185BQ9H7F4 350 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 SDHAF3Q9NRP4 125 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 UBQLN4Q9NRR5 601 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 COQ3Q9NZJ6 369 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZIM2Q9NZV7 527 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 MKLN1Q9UL63 735 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 CARD8Q9Y2G2 431 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZNF337Q9Y3M9 751 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 SPTAN1Q13813 2472 aaKnown RBP6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 CRYBG3Q68DQ2 2970 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 CELSR2Q9HCU4 2923 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 IGLV3-32A0A0A0MS00 114 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 A0A0G2JND7 137 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 FAM234BA2RU67 622 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 OR2M5A3KFT3 312 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 CLDN24A6NM45 220 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 CLCA1A8K7I4 914 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 NPIPB9F8W1W9 429 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 HMGN4O00479 90 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 RFXANKO14593 260 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 EDF1O60869 148 aaKnown RBP6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 UGT2B17O75795 530 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 CYP7B1O75881 506 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 TGDSO95455 350 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 ACTL6AO96019 429 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 IL6P05231 212 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 NGFRP08138 427 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 CHRM4P08173 479 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 PRF1P14222 555 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 GABRA1P14867 456 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZNF708P17019 499 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 POU3F2P20265 443 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 CAPN3P20807 821 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 IL11P20809 199 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 CHRNB4P30926 498 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 GCKP35557 465 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 KHKP50053 298 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 CCR4P51679 360 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 SUCLG1P53597 346 aaKnown RBP6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 CLDN15P56746 228 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 CLDN20P56880 219 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 STX1BP61266 288 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 GUCY1A3Q02108 690 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 FOXF1Q12946 379 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 SNTB1Q13884 538 aaKnown RBP6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 TOMM34Q15785 309 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 SYPL1Q16563 259 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 ARHGAP11BQ3KRB8 267 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 GPAT3Q53EU6 434 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 KLHL26Q53HC5 615 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 C6orf10Q5SRN2 563 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 TYW3Q6IPR3 259 aaKnown RBP6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 HEPHL1Q6MZM0 1159 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 CGB2Q6NT52 195 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 AAGABQ6PD74 315 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 FUNDC1Q8IVP5 155 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 PM20D2Q8IYS1 436 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 TMCO5AQ8N6Q1 288 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 GLB1L3Q8NCI6 653 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 CHDHQ8NE62 594 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 B4GALNT2Q8NHY0 566 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 POC1BQ8TC44 478 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 MIPOL1Q8TD10 442 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 ROPN1LQ96C74 230 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZG16BQ96DA0 208 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZNF845Q96IR2 970 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 CCDC28BQ9BUN5 200 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZNF350Q9GZX5 532 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 RUBCNLQ9H714 662 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 PTGES2Q9H7Z7 377 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 NPDC1Q9NQX5 325 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 MED17Q9NVC6 651 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 CCDC167Q9P0B6 97 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 KLF2Q9Y5W3 355 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 ADGRG4Q8IZF6 3080 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 FBN2P35556 2912 aa6.93□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZNF407Q9C0G0 2248 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 KIAA1549Q9HCM3 1950 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 A0A1W2PQD3 144 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 SERINC4A6NH21 518 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 DUXAA6NLW8 204 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 AHRRA9YTQ3 701 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 GTPBP1O00178 669 aaKnown RBP6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 KIAA0513O60268 411 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 STX11O75558 287 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 H6PDO95479 791 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 ANP32DO95626 131 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 NUDT14O95848 222 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 EPPINO95925 133 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 TGM6O95932 706 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 UBTFL6P0CB48 400 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 PEPDP12955 493 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 ETFAP13804 333 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 CPN1P15169 458 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 NCF2P19878 526 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 AGAP20933 346 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 BMP5P22003 454 aa6.92□□□□□ -1.3
HMGB3P1-201ENST00000393368 CHMP24386 653 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms