RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 CSTAP01040 98 aa24.66■■□□□ 1.54
MSX1-201ENST00000382723 DAPP51397 102 aa24.66■■□□□ 1.54
MSX1-201ENST00000382723 IL22RA1Q8N6P7 574 aa24.66■■□□□ 1.54
MSX1-201ENST00000382723 PIK3C3Q8NEB9 887 aa24.66■■□□□ 1.54
MSX1-201ENST00000382723 OR10G2Q8NGC3 310 aa24.66■■□□□ 1.54
MSX1-201ENST00000382723 OR5M3Q8NGP4 307 aa24.66■■□□□ 1.54
MSX1-201ENST00000382723 NKD1Q969G9 470 aa24.66■■□□□ 1.54
MSX1-201ENST00000382723 NAF1Q96HR8 494 aaKnown RBP24.66■■□□□ 1.54
MSX1-201ENST00000382723 DHRS1Q96LJ7 313 aa24.66■■□□□ 1.54
MSX1-201ENST00000382723 WDR70Q9NW82 654 aa24.66■■□□□ 1.54
MSX1-201ENST00000382723 USE1Q9NZ43 259 aa24.66■■□□□ 1.54
MSX1-201ENST00000382723 MYOTQ9UBF9 498 aa24.66■■□□□ 1.54
MSX1-201ENST00000382723 FAM186AA6NE01 2351 aa24.66■■□□□ 1.54
MSX1-201ENST00000382723 CDRT15L2A8MXV6 281 aa24.65■■□□□ 1.54
MSX1-201ENST00000382723 UGT2B11O75310 529 aa24.65■■□□□ 1.54
MSX1-201ENST00000382723 TBXA2RP21731 343 aa24.65■■□□□ 1.54
MSX1-201ENST00000382723 PNLIPRP2P54317 469 aa24.65■■□□□ 1.54
MSX1-201ENST00000382723 SMIM11AP58511 58 aa24.65■■□□□ 1.54
MSX1-201ENST00000382723 IL1RL1Q01638 556 aa24.65■■□□□ 1.54
MSX1-201ENST00000382723 IL10RAQ13651 578 aa24.65■■□□□ 1.54
MSX1-201ENST00000382723 APOOLQ6UXV4 268 aa24.65■■□□□ 1.54
MSX1-201ENST00000382723 M1APQ8TC57 530 aa24.65■■□□□ 1.54
MSX1-201ENST00000382723 ADAMTS16Q8TE57 1224 aa24.65■■□□□ 1.54
MSX1-201ENST00000382723 TMCC3Q9ULS5 477 aa24.65■■□□□ 1.54
MSX1-201ENST00000382723 RAB26Q9ULW5 256 aa24.65■■□□□ 1.54
MSX1-201ENST00000382723 CCNB2O95067 398 aa24.65■■□□□ 1.54
MSX1-201ENST00000382723 THRBP10828 461 aa24.65■■□□□ 1.54
MSX1-201ENST00000382723 ELAVL4P26378 380 aaKnown RBP24.65■■□□□ 1.54
MSX1-201ENST00000382723 PSPHP78330 225 aa24.65■■□□□ 1.54
MSX1-201ENST00000382723 NHSL2Q5HYW2 709 aa24.65■■□□□ 1.54
MSX1-201ENST00000382723 GALNT5Q7Z7M9 940 aa24.65■■□□□ 1.54
MSX1-201ENST00000382723 OR9Q2Q8NGE9 314 aa24.65■■□□□ 1.54
MSX1-201ENST00000382723 OSBPL11Q9BXB4 747 aa24.65■■□□□ 1.54
MSX1-201ENST00000382723 MMP25Q9NPA2 562 aa24.65■■□□□ 1.54
MSX1-201ENST00000382723 FBXL4Q9UKA2 621 aa24.65■■□□□ 1.54
MSX1-201ENST00000382723 A0A1W2PQ72 361 aa24.64■■□□□ 1.53
MSX1-201ENST00000382723 OR2J2O76002 312 aa24.64■■□□□ 1.53
MSX1-201ENST00000382723 NADKO95544 446 aaPredicted RBP24.64■■□□□ 1.53
MSX1-201ENST00000382723 SEC23BQ15437 767 aa24.64■■□□□ 1.53
MSX1-201ENST00000382723 CD226Q15762 336 aa24.64■■□□□ 1.53
MSX1-201ENST00000382723 DCST1Q5T197 706 aa24.64■■□□□ 1.53
MSX1-201ENST00000382723 GRAMD2AQ8IUY3 354 aa24.64■■□□□ 1.53
MSX1-201ENST00000382723 CMIPQ8IY22 773 aa24.64■■□□□ 1.53
MSX1-201ENST00000382723 SLC5A8Q8N695 610 aa24.64■■□□□ 1.53
MSX1-201ENST00000382723 PHOSPHO1Q8TCT1 267 aa24.64■■□□□ 1.53
MSX1-201ENST00000382723 ZNF570Q96NI8 536 aa24.64■■□□□ 1.53
MSX1-201ENST00000382723 FEVQ99581 238 aa24.64■■□□□ 1.53
MSX1-201ENST00000382723 ASCL3Q9NQ33 180 aa24.64■■□□□ 1.53
MSX1-201ENST00000382723 MAN2C1Q9NTJ4 1040 aa24.64■■□□□ 1.53
MSX1-201ENST00000382723 TMEFF2Q9UIK5 374 aaPredicted RBP24.64■■□□□ 1.53
MSX1-201ENST00000382723 PCDHGA6Q9Y5G7 932 aa24.64■■□□□ 1.53
MSX1-201ENST00000382723 NINQ8N4C6 2090 aa24.64■■□□□ 1.53
MSX1-201ENST00000382723 MITFO75030 526 aaPredicted RBP24.63■■□□□ 1.53
MSX1-201ENST00000382723 PPM1BO75688 479 aa24.63■■□□□ 1.53
MSX1-201ENST00000382723 IGFBP5P24593 272 aa24.63■■□□□ 1.53
MSX1-201ENST00000382723 CD82P27701 267 aa24.63■■□□□ 1.53
MSX1-201ENST00000382723 HTR2AP28223 471 aa24.63■■□□□ 1.53
MSX1-201ENST00000382723 LCN1P31025 176 aa24.63■■□□□ 1.53
MSX1-201ENST00000382723 IFNA8P32881 189 aa24.63■■□□□ 1.53
MSX1-201ENST00000382723 WLSQ5T9L3 541 aa24.63■■□□□ 1.53
MSX1-201ENST00000382723 OFCC1Q8IZS5 231 aa24.63■■□□□ 1.53
MSX1-201ENST00000382723 SLC7A13Q8TCU3 470 aa24.63■■□□□ 1.53
MSX1-201ENST00000382723 CYGBQ8WWM9 190 aa24.63■■□□□ 1.53
MSX1-201ENST00000382723 IL17BQ9UHF5 180 aa24.63■■□□□ 1.53
MSX1-201ENST00000382723 A0A1W2PRQ8 180 aa24.63■■□□□ 1.53
MSX1-201ENST00000382723 OR6C70A6NIJ9 312 aa24.63■■□□□ 1.53
MSX1-201ENST00000382723 FBXW4P57775 412 aa24.63■■□□□ 1.53
MSX1-201ENST00000382723 DGCR6Q14129 220 aa24.63■■□□□ 1.53
MSX1-201ENST00000382723 TGIF1Q15583 401 aa24.63■■□□□ 1.53
MSX1-201ENST00000382723 ZSWIM7Q19AV6 140 aa24.63■■□□□ 1.53
MSX1-201ENST00000382723 RSPO4Q2I0M5 234 aaPredicted RBP24.63■■□□□ 1.53
MSX1-201ENST00000382723 Q9H521 79 aa24.63■■□□□ 1.53
MSX1-201ENST00000382723 P4HTMQ9NXG6 502 aa24.63■■□□□ 1.53
MSX1-201ENST00000382723 SLC35A3Q9Y2D2 325 aa24.63■■□□□ 1.53
MSX1-201ENST00000382723 LRCH1Q9Y2L9 728 aa24.63■■□□□ 1.53
MSX1-201ENST00000382723 ORC6Q9Y5N6 252 aa24.63■■□□□ 1.53
MSX1-201ENST00000382723 ADAM11O75078 769 aa24.62■■□□□ 1.53
MSX1-201ENST00000382723 RYKP34925 604 aa24.62■■□□□ 1.53
MSX1-201ENST00000382723 MERTKQ12866 999 aa24.62■■□□□ 1.53
MSX1-201ENST00000382723 OR1Q1Q15612 314 aa24.62■■□□□ 1.53
MSX1-201ENST00000382723 KDM4DQ6B0I6 523 aa24.62■■□□□ 1.53
MSX1-201ENST00000382723 FAHD1Q6P587 224 aa24.62■■□□□ 1.53
MSX1-201ENST00000382723 PODNL1Q6PEZ8 512 aa24.62■■□□□ 1.53
MSX1-201ENST00000382723 MRGPREQ86SM8 312 aa24.62■■□□□ 1.53
MSX1-201ENST00000382723 MARCH3Q86UD3 253 aa24.62■■□□□ 1.53
MSX1-201ENST00000382723 NR4A3Q92570 626 aa24.62■■□□□ 1.53
MSX1-201ENST00000382723 SLC41A3Q96GZ6 507 aa24.62■■□□□ 1.53
MSX1-201ENST00000382723 ADI1Q9BV57 179 aa24.62■■□□□ 1.53
MSX1-201ENST00000382723 TOR3AQ9H497 397 aa24.62■■□□□ 1.53
MSX1-201ENST00000382723 TESQ9UGI8 421 aaKnown RBP24.62■■□□□ 1.53
MSX1-201ENST00000382723 CNOT1A5YKK6 2376 aaKnown RBP24.61■■□□□ 1.53
MSX1-201ENST00000382723 DCDC2BA2VCK2 349 aa24.61■■□□□ 1.53
MSX1-201ENST00000382723 IQCJ-SCHIP1C9J366 451 aaPredicted RBP24.61■■□□□ 1.53
MSX1-201ENST00000382723 GTPBP1O00178 669 aaKnown RBP24.61■■□□□ 1.53
MSX1-201ENST00000382723 UBL4AP11441 157 aa24.61■■□□□ 1.53
MSX1-201ENST00000382723 ST13P50502 369 aaKnown RBP24.61■■□□□ 1.53
MSX1-201ENST00000382723 ST3GAL3Q11203 375 aa24.61■■□□□ 1.53
MSX1-201ENST00000382723 GK3PQ14409 553 aa24.61■■□□□ 1.53
MSX1-201ENST00000382723 FNDC7Q5VTL7 733 aa24.61■■□□□ 1.53
MSX1-201ENST00000382723 FCRLBQ6BAA4 426 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms