RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 RPL3LQ92901 407 aaKnown RBP17.8■□□□□ 0.44
GMDS-201ENST00000380805 LRR1Q96L50 414 aa17.8■□□□□ 0.44
GMDS-201ENST00000380805 G6PC3Q9BUM1 346 aa17.8■□□□□ 0.44
GMDS-201ENST00000380805 TAPBPLQ9BX59 468 aa17.8■□□□□ 0.44
GMDS-201ENST00000380805 Q9N2J8 555 aa17.8■□□□□ 0.44
GMDS-201ENST00000380805 IRAK4Q9NWZ3 460 aa17.8■□□□□ 0.44
GMDS-201ENST00000380805 TAS2R16Q9NYV7 291 aa17.8■□□□□ 0.44
GMDS-201ENST00000380805 DIMT1Q9UNQ2 313 aaKnown RBP17.8■□□□□ 0.44
GMDS-201ENST00000380805 IRGMA1A4Y4 181 aa17.79■□□□□ 0.44
GMDS-201ENST00000380805 EFCAB9A8MZ26 197 aa17.79■□□□□ 0.44
GMDS-201ENST00000380805 PRODHO43272 600 aa17.79■□□□□ 0.44
GMDS-201ENST00000380805 PIP5K1CO60331 668 aa17.79■□□□□ 0.44
GMDS-201ENST00000380805 OR2B3O76000 313 aa17.79■□□□□ 0.44
GMDS-201ENST00000380805 GKN3PP0CG01 181 aa17.79■□□□□ 0.44
GMDS-201ENST00000380805 GAS1P54826 345 aa17.79■□□□□ 0.44
GMDS-201ENST00000380805 NCS1P62166 190 aa17.79■□□□□ 0.44
GMDS-201ENST00000380805 PRKCDQ05655 676 aa17.79■□□□□ 0.44
GMDS-201ENST00000380805 FGFBP1Q14512 234 aa17.79■□□□□ 0.44
GMDS-201ENST00000380805 SNAPC1Q16533 368 aa17.79■□□□□ 0.44
GMDS-201ENST00000380805 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.79■□□□□ 0.44
GMDS-201ENST00000380805 CMIPQ8IY22 773 aa17.79■□□□□ 0.44
GMDS-201ENST00000380805 C16orf52Q8NHV5 167 aa17.79■□□□□ 0.44
GMDS-201ENST00000380805 BRIX1Q8TDN6 353 aaKnown RBP17.79■□□□□ 0.44
GMDS-201ENST00000380805 ELF4Q99607 663 aaPredicted RBP17.79■□□□□ 0.44
GMDS-201ENST00000380805 ZNF426Q9BUY5 554 aa17.79■□□□□ 0.44
GMDS-201ENST00000380805 OR10A5Q9H207 317 aa17.79■□□□□ 0.44
GMDS-201ENST00000380805 DNAJB12Q9NXW2 375 aaKnown RBP17.79■□□□□ 0.44
GMDS-201ENST00000380805 PCDHGA3Q9Y5H0 932 aa17.79■□□□□ 0.44
GMDS-201ENST00000380805 IGKV3D-11A0A0A0MRZ8 115 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 A0A0B4J2E0 115 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 A0A1B0GX12 115 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 SNTNA6NMZ2 147 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 M0R3G1 203 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 AIREO43918 545 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 GPR4P46093 362 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 CTBP2P56545 445 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 TUBA1BP68363 451 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 BNC1Q01954 994 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 OCA2Q04671 838 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 KCNAB1Q14722 419 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 TMEM44Q2T9K0 475 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 PDZK1Q5T2W1 519 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 QSOX2Q6ZRP7 698 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 TUBA1AQ71U36 451 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 KANSL1Q7Z3B3 1105 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 MEX3DQ86XN8 651 aaKnown RBP17.78■□□□□ 0.44
GMDS-201ENST00000380805 LSMEM1Q8N8F7 131 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 RCBTB1Q8NDN9 531 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 PROKR2Q8NFJ6 384 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 OR4N2Q8NGD1 307 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 OR4Q3Q8NH05 313 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 TMEM239Q8WW34 195 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 BORCS5Q969J3 196 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 OR5M11Q96RB7 305 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 MGLLQ99685 303 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 PALMDQ9NP74 551 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.78■□□□□ 0.44
GMDS-201ENST00000380805 PRODH2Q9UF12 536 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 KLHL3Q9UH77 587 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 OSGIN1Q9UJX0 560 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 ERVK-19Q9WJR5 959 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 TMEM5Q9Y2B1 443 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 CACNA1EQ15878 2313 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 KMT2EQ8IZD2 1858 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 PRR33A8MZF0 331 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 TMEM150CB9EJG8 249 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 CDC42EP2O14613 210 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 SURF4O15260 269 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 LAMTOR5O43504 91 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 CHP2O43745 196 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 FOXD2O60548 495 aaPredicted RBP17.78■□□□□ 0.44
GMDS-201ENST00000380805 RPLP0P05388 317 aaKnown RBP17.78■□□□□ 0.44
GMDS-201ENST00000380805 GNSP15586 552 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 ENDOUP21128 410 aaKnown RBP17.78■□□□□ 0.44
GMDS-201ENST00000380805 GADD45AP24522 165 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 ARRB1P49407 418 aaPredicted RBP17.78■□□□□ 0.44
GMDS-201ENST00000380805 PPM1FP49593 454 aaPredicted RBP17.78■□□□□ 0.44
GMDS-201ENST00000380805 BMXP51813 675 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 DGUOKQ16854 277 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 PGGHGQ32M88 737 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 MINDY4Q4G0A6 757 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 YOD1Q5VVQ6 348 aaPredicted RBP17.78■□□□□ 0.44
GMDS-201ENST00000380805 TMPRSS11FQ6ZWK6 438 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 METTL27Q8N6F8 245 aaPredicted RBP17.78■□□□□ 0.44
GMDS-201ENST00000380805 NANOGP1Q8N7R0 232 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 ZSCAN1Q8NBB4 408 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 CNOT9Q92600 299 aaKnown RBP17.78■□□□□ 0.44
GMDS-201ENST00000380805 MND1Q9BWT6 205 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 FGF20Q9NP95 211 aaPredicted RBP17.78■□□□□ 0.44
GMDS-201ENST00000380805 PRMT8Q9NR22 394 aaPredicted RBP17.78■□□□□ 0.44
GMDS-201ENST00000380805 TBC1D23Q9NUY8 699 aa17.78■□□□□ 0.44
GMDS-201ENST00000380805 ARID1BQ8NFD5 2236 aaPredicted RBP17.77■□□□□ 0.44
GMDS-201ENST00000380805 SCG5P05408 212 aa17.77■□□□□ 0.44
GMDS-201ENST00000380805 TDGF1P13385 188 aa17.77■□□□□ 0.44
GMDS-201ENST00000380805 PNLIPP16233 465 aa17.77■□□□□ 0.44
GMDS-201ENST00000380805 RBM34P42696 430 aaKnown RBP17.77■□□□□ 0.44
GMDS-201ENST00000380805 ACAA2P42765 397 aaKnown RBP17.77■□□□□ 0.44
GMDS-201ENST00000380805 ATP12AP54707 1039 aa17.77■□□□□ 0.44
GMDS-201ENST00000380805 RAB40BQ12829 278 aa17.77■□□□□ 0.44
GMDS-201ENST00000380805 DSG2Q14126 1118 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms