RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 PLSCR5A0PG75 271 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 LCKP06239 509 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 YES1P07947 543 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 HES5Q5TA89 166 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 UBE2UQ5VVX9 321 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 Q8N402 240 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 UTP23Q9BRU9 249 aaKnown RBP12.8□□□□□ -0.36
GPC6-201ENST00000377047 CSNK1G3Q9Y6M4 447 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 GPR75O95800 540 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 IGHEP01854 428 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 AKR1C4P17516 323 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 RAB3BP20337 219 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 LSSP48449 732 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 GLO1Q04760 184 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 RFLNAQ6ZTI6 216 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 NXF5Q9H1B4 397 aaKnown RBP12.8□□□□□ -0.36
GPC6-201ENST00000377047 KLHL42Q9P2K6 505 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 POLHQ9Y253 713 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 CASC3O15234 703 aaKnown RBP12.8□□□□□ -0.36
GPC6-201ENST00000377047 IST1P53990 364 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 PSPHP78330 225 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 TMEM240Q5SV17 173 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 GRAMD2AQ8IUY3 354 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 SGCZQ96LD1 299 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 DYNLRB1Q9NP97 96 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 MEPEQ9NQ76 525 aaPredicted RBP12.8□□□□□ -0.36
GPC6-201ENST00000377047 SDR39U1Q9NRG7 319 aaPredicted RBP12.8□□□□□ -0.36
GPC6-201ENST00000377047 THAP10Q9P2Z0 257 aaPredicted RBP12.8□□□□□ -0.36
GPC6-201ENST00000377047 PCDHGA7Q9Y5G6 932 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 PLCH1Q4KWH8 1693 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 YKT6O15498 198 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 CACNG3O60359 315 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 C7P10643 843 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 AHRP35869 848 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 SQSTM1Q13501 440 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 VRK2Q86Y07 508 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 OR14A16Q8NHC5 309 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 KLHL9Q9P2J3 617 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 DDX60Q8IY21 1712 aaKnown RBP12.8□□□□□ -0.36
GPC6-201ENST00000377047 INMT-MINDY4F8WBC2 141 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 IFNA5P01569 189 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 RRADP55042 308 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 MOGQ16653 247 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 CPZQ66K79 652 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 LANCL3Q6ZV70 420 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 CREB3L1Q96BA8 519 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 HCAR1Q9BXC0 346 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 POTEKPQ9BYX7 375 aa12.8□□□□□ -0.36
GPC6-201ENST00000377047 CLCA1A8K7I4 914 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 H3BNC9 293 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 AKR1C2P52895 323 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 RAB38P57729 211 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 MS4A15Q8N5U1 240 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 OR5H2Q8NGV7 314 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 ASB12Q8WXK4 309 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 SYT4Q9H2B2 425 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 UBQLN4Q9NRR5 601 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 MAN2C1Q9NTJ4 1040 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 FAM86C1Q9NVL1 165 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 C14orf119Q9NWQ9 140 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 FAM230AA0A1W2PPH8 454 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 TCN2P20062 427 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 PKDCCQ504Y2 493 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 ZNF595Q8IYB9 648 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 OR1J4Q8NGS1 313 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 LRRC20Q8TCA0 184 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 FOXN4Q96NZ1 517 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 LMF2Q9BU23 707 aaKnown RBP12.79□□□□□ -0.36
GPC6-201ENST00000377047 OR10A5Q9H207 317 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 OR10A2Q9H208 303 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 SLC1A7O00341 560 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 NUDT21O43809 227 aaKnown RBP12.79□□□□□ -0.36
GPC6-201ENST00000377047 AIFM1O95831 613 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 F10P00742 488 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 PHC1P78364 1004 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 ZNF45Q02386 682 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 NUDT22Q9BRQ3 303 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 ALG8Q9BVK2 526 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 VSX1Q9NZR4 365 aaPredicted RBP12.79□□□□□ -0.36
GPC6-201ENST00000377047 BORCS7-ASMTA0A0B4J1R7 106 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 TMBIM6P55061 237 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 PPA1Q15181 289 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 HSF5Q4G112 596 aaPredicted RBP12.79□□□□□ -0.36
GPC6-201ENST00000377047 PRAMEF20Q5VT98 475 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 WBP2NLQ6ICG8 309 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 LINC00696Q6ZRV3 163 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 PGBD5Q8N414 524 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 STOML3Q8TAV4 291 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 TRAV27A0A087WT01 109 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 C17orf113A0A1B0GUU1 675 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 OTOL1A6NHN0 477 aaPredicted RBP12.79□□□□□ -0.36
GPC6-201ENST00000377047 ADRA1AP35348 466 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 SSR4P51571 173 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 CCL11P51671 97 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 DTWD1Q8N5C7 304 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 ENDOVQ8N8Q3 282 aaKnown RBP12.79□□□□□ -0.36
GPC6-201ENST00000377047 GOLM1Q8NBJ4 401 aa12.79□□□□□ -0.36
GPC6-201ENST00000377047 TSPAN4O14817 238 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 SLC5A2P31639 672 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 TMEM205Q6UW68 189 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms