RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 S100A10P60903 97 aa12.78□□□□□ -0.36
C9orf47-203ENST00000375851 HERV-K104P61576 105 aa12.78□□□□□ -0.36
C9orf47-203ENST00000375851 CDKN3Q16667 212 aa12.78□□□□□ -0.36
C9orf47-203ENST00000375851 ZNF576Q9H609 170 aa12.78□□□□□ -0.36
C9orf47-203ENST00000375851 GPN2Q9H9Y4 310 aaPredicted RBP12.78□□□□□ -0.36
C9orf47-203ENST00000375851 CNOT2Q9NZN8 540 aaKnown RBP12.78□□□□□ -0.36
C9orf47-203ENST00000375851 SLC7A11Q9UPY5 501 aa12.78□□□□□ -0.36
C9orf47-203ENST00000375851 ZNF443Q9Y2A4 671 aaPredicted RBP12.78□□□□□ -0.36
C9orf47-203ENST00000375851 ASCC3Q8N3C0 2202 aaKnown RBP12.78□□□□□ -0.36
C9orf47-203ENST00000375851 KIAA1551Q9HCM1 1747 aa12.78□□□□□ -0.36
C9orf47-203ENST00000375851 SCGB1D2O95969 90 aa12.78□□□□□ -0.36
C9orf47-203ENST00000375851 LCN1P31025 176 aa12.78□□□□□ -0.36
C9orf47-203ENST00000375851 ART1P52961 327 aa12.78□□□□□ -0.36
C9orf47-203ENST00000375851 ERVK-25P63136 954 aa12.78□□□□□ -0.36
C9orf47-203ENST00000375851 REEP5Q00765 189 aa12.78□□□□□ -0.36
C9orf47-203ENST00000375851 ATXN7L3Q14CW9 347 aaPredicted RBP12.78□□□□□ -0.36
C9orf47-203ENST00000375851 XKR7Q5GH72 579 aa12.78□□□□□ -0.36
C9orf47-203ENST00000375851 C18orf63Q68DL7 685 aa12.78□□□□□ -0.36
C9orf47-203ENST00000375851 FAM111BQ6SJ93 734 aa12.78□□□□□ -0.36
C9orf47-203ENST00000375851 BAIAP2L2Q6UXY1 529 aa12.78□□□□□ -0.36
C9orf47-203ENST00000375851 FAM83HQ6ZRV2 1179 aaPredicted RBP12.78□□□□□ -0.36
C9orf47-203ENST00000375851 SPRED1Q7Z699 444 aa12.78□□□□□ -0.36
C9orf47-203ENST00000375851 B3GNT8Q7Z7M8 397 aa12.78□□□□□ -0.36
C9orf47-203ENST00000375851 OR5AK2Q8NH90 309 aa12.78□□□□□ -0.36
C9orf47-203ENST00000375851 AKAP1Q92667 903 aaKnown RBP eCLIP12.78□□□□□ -0.36
C9orf47-203ENST00000375851 KLHL15Q96M94 604 aa12.78□□□□□ -0.36
C9orf47-203ENST00000375851 CCDC32Q9BV29 185 aa12.78□□□□□ -0.36
C9orf47-203ENST00000375851 MCOLN1Q9GZU1 580 aa12.78□□□□□ -0.36
C9orf47-203ENST00000375851 SLC6A17Q9H1V8 727 aa12.78□□□□□ -0.36
C9orf47-203ENST00000375851 GSKIPQ9P0R6 139 aa12.78□□□□□ -0.36
C9orf47-203ENST00000375851 CBLCQ9ULV8 474 aa12.78□□□□□ -0.36
C9orf47-203ENST00000375851 TEX13CA0A0J9YWL9 993 aa12.77□□□□□ -0.36
C9orf47-203ENST00000375851 K7ESM1 405 aa12.77□□□□□ -0.36
C9orf47-203ENST00000375851 ZNF26P17031 533 aaPredicted RBP12.77□□□□□ -0.36
C9orf47-203ENST00000375851 CSNK1EP49674 416 aaKnown RBP12.77□□□□□ -0.36
C9orf47-203ENST00000375851 RIN1Q13671 783 aa12.77□□□□□ -0.36
C9orf47-203ENST00000375851 PARM1Q6UWI2 310 aa12.77□□□□□ -0.36
C9orf47-203ENST00000375851 PTRH1Q86Y79 214 aaKnown RBP12.77□□□□□ -0.36
C9orf47-203ENST00000375851 UEVLDQ8IX04 471 aa12.77□□□□□ -0.36
C9orf47-203ENST00000375851 GPR137CQ8N3F9 429 aa12.77□□□□□ -0.36
C9orf47-203ENST00000375851 OR13C3Q8NGS6 347 aa12.77□□□□□ -0.36
C9orf47-203ENST00000375851 ELP5Q8TE02 316 aa12.77□□□□□ -0.36
C9orf47-203ENST00000375851 RHBDD1Q8TEB9 315 aa12.77□□□□□ -0.36
C9orf47-203ENST00000375851 QRSL1Q9H0R6 528 aaKnown RBP12.77□□□□□ -0.36
C9orf47-203ENST00000375851 CD300AQ9UGN4 299 aa12.77□□□□□ -0.36
C9orf47-203ENST00000375851 SLC5A10A0PJK1 596 aa12.77□□□□□ -0.36
C9orf47-203ENST00000375851 CIB4A0PJX0 185 aa12.77□□□□□ -0.36
C9orf47-203ENST00000375851 PRRT4C9JH25 899 aa12.77□□□□□ -0.36
C9orf47-203ENST00000375851 PLATP00750 562 aa12.77□□□□□ -0.36
C9orf47-203ENST00000375851 CHMP24386 653 aa12.77□□□□□ -0.36
C9orf47-203ENST00000375851 CA5AP35218 305 aa12.77□□□□□ -0.36
C9orf47-203ENST00000375851 NKX3-2P78367 333 aa12.77□□□□□ -0.36
C9orf47-203ENST00000375851 CSNK1G2P78368 415 aa12.77□□□□□ -0.36
C9orf47-203ENST00000375851 HSD11B2P80365 405 aa12.77□□□□□ -0.36
C9orf47-203ENST00000375851 GXYLT1Q4G148 440 aa12.77□□□□□ -0.36
C9orf47-203ENST00000375851 SPNS2Q8IVW8 549 aa12.77□□□□□ -0.36
C9orf47-203ENST00000375851 MNTQ99583 582 aa12.77□□□□□ -0.36
C9orf47-203ENST00000375851 NLKQ9UBE8 527 aa12.77□□□□□ -0.36
C9orf47-203ENST00000375851 ZSCAN5BA6NJL1 495 aa12.77□□□□□ -0.37
C9orf47-203ENST00000375851 APOC1P02654 83 aa12.77□□□□□ -0.37
C9orf47-203ENST00000375851 CAPNS1P04632 268 aa12.77□□□□□ -0.37
C9orf47-203ENST00000375851 GYPBP06028 91 aa12.77□□□□□ -0.37
C9orf47-203ENST00000375851 GPX2P18283 190 aa12.77□□□□□ -0.37
C9orf47-203ENST00000375851 TNFRSF17Q02223 184 aa12.77□□□□□ -0.37
C9orf47-203ENST00000375851 GPR18Q14330 331 aa12.77□□□□□ -0.37
C9orf47-203ENST00000375851 OR1Q1Q15612 314 aa12.77□□□□□ -0.37
C9orf47-203ENST00000375851 SLC35F2Q8IXU6 374 aa12.77□□□□□ -0.37
C9orf47-203ENST00000375851 OR14L1PQ8NHC6 308 aa12.77□□□□□ -0.37
C9orf47-203ENST00000375851 UBQLN4Q9NRR5 601 aa12.77□□□□□ -0.37
C9orf47-203ENST00000375851 FBXL3Q9UKT7 428 aa12.77□□□□□ -0.37
C9orf47-203ENST00000375851 CEPT1Q9Y6K0 416 aa12.77□□□□□ -0.37
C9orf47-203ENST00000375851 TRBV4-1A0A0J9YWV2 114 aa12.77□□□□□ -0.37
C9orf47-203ENST00000375851 CDC14CA4D256 554 aa12.77□□□□□ -0.37
C9orf47-203ENST00000375851 I6L893 689 aaPredicted RBP12.77□□□□□ -0.37
C9orf47-203ENST00000375851 RGS6P49758 472 aa12.77□□□□□ -0.37
C9orf47-203ENST00000375851 MRPL2Q5T653 305 aaKnown RBP12.77□□□□□ -0.37
C9orf47-203ENST00000375851 CHTF18Q8WVB6 975 aa12.77□□□□□ -0.37
C9orf47-203ENST00000375851 TM4SF18Q96CE8 201 aa12.77□□□□□ -0.37
C9orf47-203ENST00000375851 ZNF701Q9NV72 531 aaPredicted RBP12.77□□□□□ -0.37
C9orf47-203ENST00000375851 IL37Q9NZH6 218 aa12.77□□□□□ -0.37
C9orf47-203ENST00000375851 MGAT4AQ9UM21 535 aa12.77□□□□□ -0.37
C9orf47-203ENST00000375851 CDK5RAP2Q96SN8 1893 aa12.77□□□□□ -0.37
C9orf47-203ENST00000375851 BCORQ6W2J9 1755 aa12.76□□□□□ -0.37
C9orf47-203ENST00000375851 TRAV27A0A087WT01 109 aa12.76□□□□□ -0.37
C9orf47-203ENST00000375851 H3BNC9 293 aa12.76□□□□□ -0.37
C9orf47-203ENST00000375851 AQP9O43315 295 aa12.76□□□□□ -0.37
C9orf47-203ENST00000375851 S100A6P06703 90 aa12.76□□□□□ -0.37
C9orf47-203ENST00000375851 CFL1P23528 166 aaKnown RBP12.76□□□□□ -0.37
C9orf47-203ENST00000375851 ZNF81P51508 661 aa12.76□□□□□ -0.37
C9orf47-203ENST00000375851 SHHQ15465 462 aa12.76□□□□□ -0.37
C9orf47-203ENST00000375851 PGGHGQ32M88 737 aa12.76□□□□□ -0.37
C9orf47-203ENST00000375851 FIP1L1Q6UN15 594 aaKnown RBP12.76□□□□□ -0.37
C9orf47-203ENST00000375851 STX12Q86Y82 276 aa12.76□□□□□ -0.37
C9orf47-203ENST00000375851 ZNF100Q8IYN0 542 aa12.76□□□□□ -0.37
C9orf47-203ENST00000375851 OR5W2Q8NH69 310 aa12.76□□□□□ -0.37
C9orf47-203ENST00000375851 LRRC20Q8TCA0 184 aa12.76□□□□□ -0.37
C9orf47-203ENST00000375851 SPRYD4Q8WW59 207 aaPredicted RBP12.76□□□□□ -0.37
C9orf47-203ENST00000375851 LMF2Q9BU23 707 aaKnown RBP12.76□□□□□ -0.37
C9orf47-203ENST00000375851 IL21Q9HBE4 155 aa12.76□□□□□ -0.37
C9orf47-203ENST00000375851 CUTCQ9NTM9 273 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms