RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 TMEM239Q8WW34 195 aa17.38■□□□□ 0.37
USP49-202ENST00000373010 RFKQ969G6 155 aa17.38■□□□□ 0.37
USP49-202ENST00000373010 C1GALT1C1Q96EU7 318 aa17.38■□□□□ 0.37
USP49-202ENST00000373010 OR52D1Q9H346 318 aa17.38■□□□□ 0.37
USP49-202ENST00000373010 ZNF576Q9H609 170 aa17.38■□□□□ 0.37
USP49-202ENST00000373010 SP140LQ9H930 580 aa17.38■□□□□ 0.37
USP49-202ENST00000373010 WSB2Q9NYS7 404 aaPredicted RBP17.38■□□□□ 0.37
USP49-202ENST00000373010 HCN3Q9P1Z3 774 aa17.38■□□□□ 0.37
USP49-202ENST00000373010 CBLCQ9ULV8 474 aa17.38■□□□□ 0.37
USP49-202ENST00000373010 SF3B6Q9Y3B4 125 aaKnown RBP17.38■□□□□ 0.37
USP49-202ENST00000373010 A0A0A6YYC8 382 aaPredicted RBP17.37■□□□□ 0.37
USP49-202ENST00000373010 SMIM30A4D0T7 59 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 SLC9B1P1A6NJY1 282 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 I3L1I5 382 aaPredicted RBP17.37■□□□□ 0.37
USP49-202ENST00000373010 BRINP1O60477 761 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 DLGAP3O95886 979 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 LALBAP00709 142 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 TPBGQ13641 420 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 ZCCHC12Q6PEW1 402 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 VWA5B2Q8N398 1253 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 ZNF614Q8N883 585 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 KLHDC7BQ96G42 594 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 LRRC61Q9BV99 259 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 KRCC1Q9NPI7 259 aaPredicted RBP17.37■□□□□ 0.37
USP49-202ENST00000373010 GPR27Q9NS67 375 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 C14orf119Q9NWQ9 140 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 SIDT1Q9NXL6 827 aaKnown RBP17.37■□□□□ 0.37
USP49-202ENST00000373010 LOC110117498-PIK3R3F6TDL0 507 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 STK25O00506 426 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 CDC20Q12834 499 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 PLK5Q496M5 336 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 MCATQ8IVS2 390 aaKnown RBP17.37■□□□□ 0.37
USP49-202ENST00000373010 LAX1Q8IWV1 398 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 ARHGEF39Q8N4T4 335 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 DEFB119Q8N690 84 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 C19orf47Q8N9M1 422 aaKnown RBP17.37■□□□□ 0.37
USP49-202ENST00000373010 ZNF485Q8NCK3 441 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 FANK1Q8TC84 345 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 ARHGAP9Q9BRR9 750 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 MED20Q9H944 212 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 MED17Q9NVC6 651 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 MTCH2Q9Y6C9 303 aa17.37■□□□□ 0.37
USP49-202ENST00000373010 SYNDIG1LA6NDD5 238 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 TGFBR3LH3BV60 316 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 HRKO00198 91 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 CDC123O75794 336 aaPredicted RBP17.36■□□□□ 0.37
USP49-202ENST00000373010 KCNK2O95069 426 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 MSL3P1P0C860 447 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 SLC35E2P0CK97 266 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 ZNF791Q3KP31 576 aaPredicted RBP17.36■□□□□ 0.37
USP49-202ENST00000373010 LRIT3Q3SXY7 679 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 CRTC2Q53ET0 693 aaPredicted RBP17.36■□□□□ 0.37
USP49-202ENST00000373010 SLC35F1Q5T1Q4 408 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 CLDN22Q8N7P3 220 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 SYT14Q8NB59 555 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 OR4N2Q8NGD1 307 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 GRHL3Q8TE85 626 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 ASB15Q8WXK1 588 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 CNOT9Q92600 299 aaKnown RBP17.36■□□□□ 0.37
USP49-202ENST00000373010 UFD1Q92890 307 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 ORAI3Q9BRQ5 295 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 TPSD1Q9BZJ3 242 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 A0A1W2PPC4 97 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 ZC3H12DA2A288 527 aaKnown RBP17.36■□□□□ 0.37
USP49-202ENST00000373010 OR2W5A6NFC9 320 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 NKX2-2O95096 273 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 HMGN1P05114 100 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 HTR1FP30939 366 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 HNRNPA0Q13151 305 aaKnown RBP17.36■□□□□ 0.37
USP49-202ENST00000373010 PDZK1Q5T2W1 519 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 NXNL2Q5VZ03 156 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 SMARCD3Q6STE5 483 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 CXXC5Q7LFL8 322 aaKnown RBP17.36■□□□□ 0.37
USP49-202ENST00000373010 PARGQ86W56 976 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 BRIX1Q8TDN6 353 aaKnown RBP17.36■□□□□ 0.37
USP49-202ENST00000373010 SLC25A46Q96AG3 418 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 NACC2Q96BF6 587 aa17.36■□□□□ 0.37
USP49-202ENST00000373010 H2AFY2Q9P0M6 372 aaPredicted RBP17.36■□□□□ 0.37
USP49-202ENST00000373010 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.35■□□□□ 0.37
USP49-202ENST00000373010 AK1P00568 194 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 S1PR1P21453 382 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 SDC2P34741 201 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 ATP6V1E1P36543 226 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 MAT1AQ00266 395 aaKnown RBP17.35■□□□□ 0.37
USP49-202ENST00000373010 FABP5Q01469 135 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 RUNX1T1Q06455 604 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 ERV3-1Q14264 604 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 PLBD1Q6P4A8 553 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 HS6ST2Q96MM7 605 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 CD180Q99467 661 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 ZNF649Q9BS31 505 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 CPNE5Q9HCH3 593 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 ISYNA1Q9NPH2 558 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 EXOGQ9Y2C4 368 aaKnown RBP17.35■□□□□ 0.37
USP49-202ENST00000373010 ATXN8OSP0DMR3 200 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 TBXA2RP21731 343 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 SSTR4P31391 388 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 EMDP50402 254 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 PSG6Q00889 435 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 ZMAT1Q5H9K5 638 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms