RNA–Protein interactions for RNA: ENST00000368914.7

SEMA6C-204, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-204ENST00000368914 OAFQ86UD1 273 aa13.17□□□□□ -0.3
SEMA6C-204ENST00000368914 APLFQ8IW19 511 aaPredicted RBP13.17□□□□□ -0.3
SEMA6C-204ENST00000368914 SETD9Q8NE22 299 aa13.17□□□□□ -0.3
SEMA6C-204ENST00000368914 OR4D11Q8NGI4 311 aa13.17□□□□□ -0.3
SEMA6C-204ENST00000368914 DOCK7Q96N67 2140 aa13.17□□□□□ -0.3
SEMA6C-204ENST00000368914 NTN4Q9HB63 628 aa13.17□□□□□ -0.3
SEMA6C-204ENST00000368914 KRCC1Q9NPI7 259 aaPredicted RBP13.17□□□□□ -0.3
SEMA6C-204ENST00000368914 MED31Q9Y3C7 131 aa13.17□□□□□ -0.3
SEMA6C-204ENST00000368914 UTS2O95399 124 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 PABPC4LP0CB38 370 aaKnown RBP13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 OR1Q1Q15612 314 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 SATL1Q86VE3 508 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 SLC30A8Q8IWU4 369 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 OR6K6Q8NGW6 343 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 ASB15Q8WXK1 588 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 CDCP1Q9H5V8 836 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 PLOD3O60568 738 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 ICOSLGO75144 302 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 PAICSP22234 425 aaKnown RBP13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 GSTT1P30711 240 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 MADCAM1Q13477 382 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 CBLN3Q6UW01 205 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 C6orf15Q6UXA7 325 aaPredicted RBP13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 FRRS1Q6ZNA5 592 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 RTL4Q6ZR62 310 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 CLK4Q9HAZ1 481 aaKnown RBP13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 TOR4AQ9NXH8 423 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 TSC22D4Q9Y3Q8 395 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 CACNA1AO00555 2505 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 ANKRD11Q6UB99 2663 aaPredicted RBP13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 GCM2O75603 506 aaPredicted RBP13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 GABREP78334 506 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 PSG6Q00889 435 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 SPATS1Q496A3 300 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 LIN52Q52LA3 116 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 GPR107Q5VW38 600 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 B3GNTL1Q67FW5 361 aaPredicted RBP13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 OR2L13Q8N349 312 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 GOT1L1Q8NHS2 421 aaPredicted RBP13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 ADAMTS18Q8TE60 1221 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 COL25A1Q9BXS0 654 aaPredicted RBP13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 A4GALTQ9NPC4 353 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 GPR27Q9NS67 375 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 SIRT5Q9NXA8 310 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 FLRT3Q9NZU0 649 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 PPP4R1LQ9P1A2 415 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 PADI2Q9Y2J8 665 aa13.16□□□□□ -0.3
SEMA6C-204ENST00000368914 ATP1B1P05026 303 aa13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 GYPBP06028 91 aa13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 E2F2Q14209 437 aa13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 ZC3H10Q96K80 434 aaKnown RBP13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 PCDHGA8Q9Y5G5 932 aa13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 HOXD12P35452 270 aa13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 ELOAQ14241 798 aaKnown RBP13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 CPEB2Q7Z5Q1 589 aaKnown RBP13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 PTPMT1Q8WUK0 201 aaPredicted RBP13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 CDC6Q99741 560 aa13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 PELOQ9BRX2 385 aaKnown RBP13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 LRFN3Q9BTN0 628 aa13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 DSN1Q9H410 356 aa13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 HPF1Q9NWY4 346 aa13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 ZFAND5O76080 213 aa13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 OR6B1O95007 311 aa13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 MRPL3P09001 348 aaKnown RBP13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 SMIM10L1P0DMW3 83 aa13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 SRYQ05066 204 aa13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 CD47Q08722 323 aa13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 MICAQ29983 383 aa13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 ISXQ2M1V0 245 aa13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 SHQ1Q6PI26 577 aaKnown RBP13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 SPATC1Q76KD6 591 aa13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 SMIM10Q96HG1 83 aa13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 SAMD8Q96LT4 415 aa13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 UBQLN4Q9NRR5 601 aa13.15□□□□□ -0.3
SEMA6C-204ENST00000368914 MCIDASD6RGH6 385 aa13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 BCAS1O75363 584 aaPredicted RBP13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 ALPLP05186 524 aa13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 HOXA6P31267 233 aa13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 RFX4Q33E94 735 aa13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 BMP8AQ7Z5Y6 402 aa13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 KMT5CQ86Y97 462 aa13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 SGCDQ92629 289 aa13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 SPATA9Q9BWV2 254 aa13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 PINK1Q9BXM7 581 aa13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 TSPAN10Q9H1Z9 355 aaPredicted RBP13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 CLN6Q9NWW5 311 aa13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 TNFRSF10DQ9UBN6 386 aa13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 GP1BBP13224 206 aa13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 TRHRP34981 398 aaPredicted RBP13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 CCL11P51671 97 aa13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 ATP12AP54707 1039 aa13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 ATP1A1-AS1Q5TC04 95 aa13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 RAET1LQ5VY80 246 aa13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 GPR141Q7Z602 305 aa13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 OR14A16Q8NHC5 309 aa13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 PFN4Q8NHR9 129 aa13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 SLC38A2Q96QD8 506 aa13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 SARGQ9BW04 601 aa13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 TRIM2Q9C040 744 aa13.14□□□□□ -0.31
SEMA6C-204ENST00000368914 MAGIXQ9H6Y5 334 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms