RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 MLLT11Q13015 90 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 ZNF267Q14586 743 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 ZNF404Q494X3 552 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 ANKDD1AQ495B1 522 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 WDR45BQ5MNZ6 344 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 ATCAYQ86WG3 371 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 OR2T33Q8NG76 320 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 OR51Q1Q8NH59 317 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 CHCHD6Q9BRQ6 235 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 TBC1D17Q9HA65 648 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 CAPN10Q9HC96 672 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 ENAMQ9NRM1 1142 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 CORINQ9Y5Q5 1042 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 METTL15A6NJ78 407 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 J3QRK9 145 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 SURF4O15260 269 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 SDC3O75056 442 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 NTN1O95631 604 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 CKMT1AP12532 417 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 SSTR4P31391 388 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 TGFBR1P36897 503 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 GPR3P46089 330 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 MTNR1AP48039 350 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 CSNK1EP49674 416 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 BTG2P78543 158 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 FUT7Q11130 342 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 ZNF141Q15928 474 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 AMZ1Q400G9 498 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 CLEC12AQ5QGZ9 265 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 PDZK1Q5T2W1 519 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 Q6ZNX1 250 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 IGFN1Q86VF2 1251 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 C7orf57Q8NEG2 295 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 OR52L1Q8NGH7 329 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 OR4Q3Q8NH05 313 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 RNFT2Q96EX2 444 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 TRIM2Q9C040 744 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 HHATLQ9HCP6 504 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 LRIT1Q9P2V4 623 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 SEC14L4Q9UDX3 406 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 CLEC2DQ9UHP7 191 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 EXOSC1Q9Y3B2 195 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 CLDN16Q9Y5I7 305 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 CSNK1G3Q9Y6M4 447 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 RNF215Q9Y6U7 377 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 NUP210LQ5VU65 1888 aa16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 SPAG17Q6Q759 2223 aa16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 BCAT2O15382 392 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 NUDT21O43809 227 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 CDC123O75794 336 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 CD1CP29017 333 aa16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 IDUAP35475 653 aa16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 AFF3P51826 1226 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 ERV3-1Q14264 604 aa16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 SSX1Q16384 188 aa16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 SLC30A6Q6NXT4 461 aa16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 MED25Q71SY5 747 aa16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 ZNF550Q7Z398 422 aa16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 ZAR1Q86SH2 424 aa16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 CMIPQ8IY22 773 aa16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 ABCA7Q8IZY2 2146 aa16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 MVB12AQ96EY5 273 aa16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 NXF2Q9GZY0 626 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 SPRTNQ9H040 489 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 DUSP15Q9H1R2 295 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 ISYNA1Q9NPH2 558 aa16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 UCKL1Q9NWZ5 548 aa16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 PRODH2Q9UF12 536 aa16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 MED31Q9Y3C7 131 aa16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 MMACHCQ9Y4U1 282 aa16.93■□□□□ 0.3
PDLIM7-203ENST00000359895 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 TMEM129A0AVI4 362 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 STK25O00506 426 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 CHP2O43745 196 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 RCBTB2O95199 551 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 IFI30P13284 250 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 BCKDHBP21953 392 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 SOX6P35712 828 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 RBM34P42696 430 aaKnown RBP16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 CXCL12P48061 93 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 RFX3P48380 749 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 ARL4DP49703 201 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 GAS1P54826 345 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 CTBP2P56545 445 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 TMED1Q13445 227 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 FGFBP1Q14512 234 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 TMPRSS11FQ6ZWK6 438 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 PLXDC1Q8IUK5 500 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 OR7G1Q8NGA0 311 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 FANK1Q8TC84 345 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 CNOT9Q92600 299 aaKnown RBP16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 SAMD8Q96LT4 415 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 CENPOQ9BU64 300 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 CNPPD1Q9BV87 410 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 OR10A5Q9H207 317 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 ERVMER34-1Q9H9K5 563 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 CUTCQ9NTM9 273 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 SIDT1Q9NXL6 827 aaKnown RBP16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 GMEB2Q9UKD1 530 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 CFL2Q9Y281 166 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms