RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ZNF767PQ75MW2 155 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 ACBD7Q8N6N7 88 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 PLEKHO2Q8TD55 490 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 ZNRF4Q8WWF5 429 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 FUCA2Q9BTY2 467 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 DERL2Q9GZP9 239 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 STSP08842 583 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 RUNX3Q13761 415 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 EDDM3AQ14507 147 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 KCNJ16Q9NPI9 418 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 PRAMEF27A3QJZ7 478 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 STMND1H3BQB6 276 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 APBB3O95704 486 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 PRAMEF9Q5VWM5 478 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 KIAA1211LQ6NV74 962 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 OR5D14Q8NGL3 314 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 SAMD8Q96LT4 415 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 ALOXE3Q9BYJ1 711 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 AQP12BA6NM10 295 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 E7ESA3 106 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 CER1O95813 267 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 DAP3P51398 398 aaKnown RBP16.3■□□□□ 0.2
COL27A1-201ENST00000356083 ABHD18Q0P651 414 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 ELAVL3Q14576 367 aaKnown RBP16.3■□□□□ 0.2
COL27A1-201ENST00000356083 TCEAL8Q8IYN2 117 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 TCTEX1D2Q8WW35 142 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 ATG4BQ9Y4P1 393 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 SOCS5O75159 536 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 GRPP07492 148 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 ZXDBP98169 803 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 ZDHHC14Q8IZN3 488 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 GNG12Q9UBI6 72 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 GABRQQ9UN88 632 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 PPP1R11O60927 126 aaPredicted RBP16.3■□□□□ 0.2
COL27A1-201ENST00000356083 OR2J3O76001 311 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 LRRC42Q9Y546 428 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 CHRNB2P17787 502 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 C14orf80Q86SX3 495 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 SULF2Q8IWU5 870 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 MKXQ8IYA7 352 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 SPARTQ8N0X7 666 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 ZNF454Q8N9F8 522 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 RLN3Q8WXF3 142 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 INTS12Q96CB8 462 aaKnown RBP16.3■□□□□ 0.2
COL27A1-201ENST00000356083 MOCOSQ96EN8 888 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 ADAM19Q9H013 955 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 ABCG5Q9H222 651 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 SLC38A1Q9H2H9 487 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 ZNF446Q9NWS9 450 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 ANKRD10Q9NXR5 420 aa16.3■□□□□ 0.2
COL27A1-201ENST00000356083 SOD2P04179 222 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 CHRNB1P11230 501 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 SNCAP37840 140 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 GPR50Q13585 617 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 RBMS3Q6XE24 437 aaKnown RBP16.29■□□□□ 0.2
COL27A1-201ENST00000356083 ZNF419Q96HQ0 510 aaPredicted RBP16.29■□□□□ 0.2
COL27A1-201ENST00000356083 ADOQ96SZ5 270 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 NRXN1Q9ULB1 1477 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 SLC22A31A6NKX4 558 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 BCAS2O75934 225 aaPredicted RBP16.29■□□□□ 0.2
COL27A1-201ENST00000356083 RAB3BP20337 219 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 BATF2Q8N1L9 274 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 RAB7BQ96AH8 199 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 DPH1Q9BZG8 443 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 C1orf226A1L170 272 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 CDK1P06493 297 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 ZNF182P17025 639 aaPredicted RBP16.29■□□□□ 0.2
COL27A1-201ENST00000356083 RAB3AP20336 220 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 FPR1P21462 350 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 DPP4P27487 766 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 IL1R2P27930 398 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 ERVK-25P63136 954 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 OR11L1Q8NGX0 322 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 ARRDC3Q96B67 414 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 SLC25A18Q9H1K4 315 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 SMOC2Q9H3U7 446 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 OLAHQ9NV23 265 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 OARD1Q9Y530 152 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 ZNF440Q8IYI8 595 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 OR8J1Q8NGP2 316 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 ZFP90Q8TF47 636 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 MITD1Q8WV92 249 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 UPRTQ96BW1 309 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 HRH4Q9H3N8 390 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 STEAP1Q9UHE8 339 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 CACNA1SQ13698 1873 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 MAP2K3P46734 347 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 POU4F2Q12837 409 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 OPCMLQ14982 345 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 OGFOD3Q6PK18 319 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 NSUN5Q96P11 429 aaKnown RBP16.29■□□□□ 0.2
COL27A1-201ENST00000356083 SCN8AQ9UQD0 1980 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 SLC22A5O76082 557 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 IL7P13232 177 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 MC3RP41968 323 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 RNF151Q2KHN1 245 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 NDUFAF5Q5TEU4 345 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 PRAMEF20Q5VT98 475 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 DCAF4L2Q8NA75 395 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 SPIN2AQ99865 258 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms