RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 BTG2P78543 158 aa15.46■□□□□ 0.07
SAMM50-201ENST00000350028 PRKCDQ05655 676 aa15.46■□□□□ 0.07
SAMM50-201ENST00000350028 MLLT11Q13015 90 aaPredicted RBP15.46■□□□□ 0.07
SAMM50-201ENST00000350028 TMED1Q13445 227 aa15.46■□□□□ 0.07
SAMM50-201ENST00000350028 SERTAD2Q14140 314 aa15.46■□□□□ 0.07
SAMM50-201ENST00000350028 ERV3-1Q14264 604 aa15.46■□□□□ 0.07
SAMM50-201ENST00000350028 ZNF267Q14586 743 aaPredicted RBP15.46■□□□□ 0.07
SAMM50-201ENST00000350028 CLEC12AQ5QGZ9 265 aa15.46■□□□□ 0.07
SAMM50-201ENST00000350028 ZAR1Q86SH2 424 aa15.46■□□□□ 0.07
SAMM50-201ENST00000350028 CDK20Q8IZL9 346 aa15.46■□□□□ 0.07
SAMM50-201ENST00000350028 CARFQ8N187 725 aa15.46■□□□□ 0.07
SAMM50-201ENST00000350028 SIX5Q8N196 739 aa15.46■□□□□ 0.07
SAMM50-201ENST00000350028 OR2T33Q8NG76 320 aa15.46■□□□□ 0.07
SAMM50-201ENST00000350028 OR9Q1Q8NGQ5 310 aa15.46■□□□□ 0.07
SAMM50-201ENST00000350028 BRIX1Q8TDN6 353 aaKnown RBP15.46■□□□□ 0.07
SAMM50-201ENST00000350028 DNASE2BQ8WZ79 361 aa15.46■□□□□ 0.07
SAMM50-201ENST00000350028 SLC35B4Q969S0 331 aa15.46■□□□□ 0.07
SAMM50-201ENST00000350028 RNFT2Q96EX2 444 aa15.46■□□□□ 0.07
SAMM50-201ENST00000350028 CAPN10Q9HC96 672 aa15.46■□□□□ 0.07
SAMM50-201ENST00000350028 SEC14L4Q9UDX3 406 aa15.46■□□□□ 0.07
SAMM50-201ENST00000350028 CLDN16Q9Y5I7 305 aa15.46■□□□□ 0.07
SAMM50-201ENST00000350028 CEP192Q8TEP8 1941 aa15.46■□□□□ 0.07
SAMM50-201ENST00000350028 MYL12AP19105 171 aa15.46■□□□□ 0.06
SAMM50-201ENST00000350028 GPR3P46089 330 aa15.46■□□□□ 0.06
SAMM50-201ENST00000350028 MTNR1AP48039 350 aa15.46■□□□□ 0.06
SAMM50-201ENST00000350028 FUT7Q11130 342 aa15.46■□□□□ 0.06
SAMM50-201ENST00000350028 ZNF141Q15928 474 aa15.46■□□□□ 0.06
SAMM50-201ENST00000350028 INAQ16352 499 aa15.46■□□□□ 0.06
SAMM50-201ENST00000350028 AADACL4Q5VUY2 407 aa15.46■□□□□ 0.06
SAMM50-201ENST00000350028 SLC30A6Q6NXT4 461 aa15.46■□□□□ 0.06
SAMM50-201ENST00000350028 MFSD4AQ8N468 514 aa15.46■□□□□ 0.06
SAMM50-201ENST00000350028 OR51Q1Q8NH59 317 aa15.46■□□□□ 0.06
SAMM50-201ENST00000350028 CLDN23Q96B33 292 aa15.46■□□□□ 0.06
SAMM50-201ENST00000350028 CENPOQ9BU64 300 aa15.46■□□□□ 0.06
SAMM50-201ENST00000350028 G6PC3Q9BUM1 346 aa15.46■□□□□ 0.06
SAMM50-201ENST00000350028 NXF2Q9GZY0 626 aaKnown RBP15.46■□□□□ 0.06
SAMM50-201ENST00000350028 SPRTNQ9H040 489 aaPredicted RBP15.46■□□□□ 0.06
SAMM50-201ENST00000350028 Q9N2J8 555 aa15.46■□□□□ 0.06
SAMM50-201ENST00000350028 EXOSC1Q9Y3B2 195 aaKnown RBP15.46■□□□□ 0.06
SAMM50-201ENST00000350028 RNF215Q9Y6U7 377 aa15.46■□□□□ 0.06
SAMM50-201ENST00000350028 CACNA1IQ9P0X4 2223 aa15.45■□□□□ 0.06
SAMM50-201ENST00000350028 CDC42EP2O14613 210 aa15.45■□□□□ 0.06
SAMM50-201ENST00000350028 SDC3O75056 442 aa15.45■□□□□ 0.06
SAMM50-201ENST00000350028 BMP4P12644 408 aa15.45■□□□□ 0.06
SAMM50-201ENST00000350028 IFI30P13284 250 aa15.45■□□□□ 0.06
SAMM50-201ENST00000350028 CD1CP29017 333 aa15.45■□□□□ 0.06
SAMM50-201ENST00000350028 CSNK1EP49674 416 aaKnown RBP15.45■□□□□ 0.06
SAMM50-201ENST00000350028 ITGADQ13349 1161 aa15.45■□□□□ 0.06
SAMM50-201ENST00000350028 AMZ1Q400G9 498 aa15.45■□□□□ 0.06
SAMM50-201ENST00000350028 PDZK1Q5T2W1 519 aa15.45■□□□□ 0.06
SAMM50-201ENST00000350028 RPL13AP3Q6NVV1 102 aa15.45■□□□□ 0.06
SAMM50-201ENST00000350028 ZC3H14Q6PJT7 736 aaKnown RBP15.45■□□□□ 0.06
SAMM50-201ENST00000350028 WDR88Q6ZMY6 472 aa15.45■□□□□ 0.06
SAMM50-201ENST00000350028 TMPRSS11FQ6ZWK6 438 aa15.45■□□□□ 0.06
SAMM50-201ENST00000350028 CNOT9Q92600 299 aaKnown RBP15.45■□□□□ 0.06
SAMM50-201ENST00000350028 AHCYL2Q96HN2 611 aaKnown RBP15.45■□□□□ 0.06
SAMM50-201ENST00000350028 SAMD8Q96LT4 415 aa15.45■□□□□ 0.06
SAMM50-201ENST00000350028 TRIM2Q9C040 744 aa15.45■□□□□ 0.06
SAMM50-201ENST00000350028 ISYNA1Q9NPH2 558 aa15.45■□□□□ 0.06
SAMM50-201ENST00000350028 ENAMQ9NRM1 1142 aa15.45■□□□□ 0.06
SAMM50-201ENST00000350028 UCKL1Q9NWZ5 548 aa15.45■□□□□ 0.06
SAMM50-201ENST00000350028 SIDT1Q9NXL6 827 aaKnown RBP15.45■□□□□ 0.06
SAMM50-201ENST00000350028 LRIT1Q9P2V4 623 aa15.45■□□□□ 0.06
SAMM50-201ENST00000350028 GPR52Q9Y2T5 361 aa15.45■□□□□ 0.06
SAMM50-201ENST00000350028 MED31Q9Y3C7 131 aa15.45■□□□□ 0.06
SAMM50-201ENST00000350028 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.44■□□□□ 0.06
SAMM50-201ENST00000350028 DSCR3O14972 297 aa15.44■□□□□ 0.06
SAMM50-201ENST00000350028 CDC123O75794 336 aaPredicted RBP15.44■□□□□ 0.06
SAMM50-201ENST00000350028 RCBTB2O95199 551 aa15.44■□□□□ 0.06
SAMM50-201ENST00000350028 IGKV1D-16P01601 117 aa15.44■□□□□ 0.06
SAMM50-201ENST00000350028 HBQ1P09105 142 aa15.44■□□□□ 0.06
SAMM50-201ENST00000350028 ETV5P41161 510 aa15.44■□□□□ 0.06
SAMM50-201ENST00000350028 RFX3P48380 749 aa15.44■□□□□ 0.06
SAMM50-201ENST00000350028 ETV1P50549 477 aa15.44■□□□□ 0.06
SAMM50-201ENST00000350028 CDH11P55287 796 aa15.44■□□□□ 0.06
SAMM50-201ENST00000350028 DOC2BQ14184 412 aa15.44■□□□□ 0.06
SAMM50-201ENST00000350028 ZNF550Q7Z398 422 aa15.44■□□□□ 0.06
SAMM50-201ENST00000350028 C11orf74Q86VG3 221 aa15.44■□□□□ 0.06
SAMM50-201ENST00000350028 CACTIN-AS1Q8N1I8 211 aa15.44■□□□□ 0.06
SAMM50-201ENST00000350028 OR52L1Q8NGH7 329 aa15.44■□□□□ 0.06
SAMM50-201ENST00000350028 RNF217Q8TC41 542 aa15.44■□□□□ 0.06
SAMM50-201ENST00000350028 CNPPD1Q9BV87 410 aa15.44■□□□□ 0.06
SAMM50-201ENST00000350028 DPH1Q9BZG8 443 aa15.44■□□□□ 0.06
SAMM50-201ENST00000350028 OR10A5Q9H207 317 aa15.44■□□□□ 0.06
SAMM50-201ENST00000350028 TBC1D17Q9HA65 648 aa15.44■□□□□ 0.06
SAMM50-201ENST00000350028 PRODH2Q9UF12 536 aa15.44■□□□□ 0.06
SAMM50-201ENST00000350028 hCG_2014768A0A024R1R8 64 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 TMEM129A0AVI4 362 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 NPIPB9F8W1W9 429 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 HRKO00198 91 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 CHP2O43745 196 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 GPX5O75715 221 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 SULT1C4O75897 302 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 CH25HO95992 272 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 BMP7P18075 431 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 BCKDHBP21953 392 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 PSMA1P25786 263 aaKnown RBP15.43■□□□□ 0.06
SAMM50-201ENST00000350028 SOX6P35712 828 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 ATP12AP54707 1039 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 CTBP2P56545 445 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms