RNA–Protein interactions for RNA: ENST00000341423.9

HMGB1-203, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB1, Length 5,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-203ENST00000341423 BCAS1O75363 584 aaPredicted RBP7.82□□□□□ -1.16
HMGB1-203ENST00000341423 SLITRK5O94991 958 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 S1PR1P21453 382 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 CNR1P21554 472 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 NMBRP28336 390 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 SSTR4P31391 388 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 CRHR1P34998 444 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 ARR3P36575 388 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 CEACAM3P40198 252 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 PRKCIP41743 596 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 CTSCP53634 463 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 CLDN17P56750 224 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 CA9Q16790 459 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 ABCA11PQ4W5N1 156 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 ACSBG2Q5FVE4 666 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 SPPL2CQ8IUH8 684 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 ZNF516Q92618 1163 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 TRIB3Q96RU7 358 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 CRNNQ9UBG3 495 aaPredicted RBP7.82□□□□□ -1.16
HMGB1-203ENST00000341423 AHRRA9YTQ3 701 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 FAM25AB3EWG3 89 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 FAM25CB3EWG5 89 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 FAM25GB3EWG6 89 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 ZNF732B4DXR9 585 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 F5H5K5 113 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 H7C2Y5 167 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 LIASO43766 372 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 ADAM23O75077 832 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 SLC16A8O95907 504 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 GBAP04062 536 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 HOXB6P17509 224 aaKnown RBP7.82□□□□□ -1.16
HMGB1-203ENST00000341423 MYL9P24844 172 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 SNU13P55769 128 aaKnown RBP7.82□□□□□ -1.16
HMGB1-203ENST00000341423 NKX3-2P78367 333 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 ARSKQ6UWY0 536 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.82□□□□□ -1.16
HMGB1-203ENST00000341423 TPRA1Q86W33 373 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 SULF2Q8IWU5 870 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 OR52R1Q8NGF1 315 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 ESAMQ96AP7 390 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 CCDC115Q96NT0 180 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 FAM129BQ96TA1 746 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 APOL4Q9BPW4 351 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 SLC35A5Q9BS91 424 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 HES4Q9HCC6 221 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 CTPS2Q9NRF8 586 aa7.82□□□□□ -1.16
HMGB1-203ENST00000341423 MYO18BQ8IUG5 2567 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 RPSAP08865 295 aaKnown RBP7.81□□□□□ -1.16
HMGB1-203ENST00000341423 ZNF44P15621 663 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 NAGAP17050 411 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 STT3AP46977 705 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 AGERQ15109 404 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 DNAL1Q4LDG9 190 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 TMEM107Q6UX40 140 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 FADS6Q8N9I5 356 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 CYGBQ8WWM9 190 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 SEPHS2Q99611 448 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 TMEM208Q9BTX3 173 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 SLC26A1Q9H2B4 701 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 EGLN3Q9H6Z9 239 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 CISD1Q9NZ45 108 aaKnown RBP7.81□□□□□ -1.16
HMGB1-203ENST00000341423 POMT2Q9UKY4 750 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 ICKQ9UPZ9 632 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 A0A087WZY1 265 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 A0A096LPI6 279 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 ACOX3O15254 700 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 ATP5HO75947 161 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 IGHV3-9P01782 118 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 CTSSP25774 331 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 SSTR1P30872 391 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 BMXP51813 675 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 ATP1B3P54709 279 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 RAB11BQ15907 218 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 SPATC1Q76KD6 591 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 FCRLAQ7L513 359 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 ST13P4Q8IZP2 240 aaPredicted RBP7.81□□□□□ -1.16
HMGB1-203ENST00000341423 ACOT4Q8N9L9 421 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 OR2L3Q8NG85 312 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 CCL4L1Q8NHW4 92 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 CLN6Q9NWW5 311 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 BAIAP2L1Q9UHR4 511 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 GSTK1Q9Y2Q3 226 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 SLC6A5Q9Y345 797 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 COL18A1P39060 1754 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 SONP18583 2426 aaKnown RBP7.81□□□□□ -1.16
HMGB1-203ENST00000341423 PLATP00750 562 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 EFNA1P20827 205 aaPredicted RBP7.81□□□□□ -1.16
HMGB1-203ENST00000341423 APEX1P27695 318 aaKnown RBP7.81□□□□□ -1.16
HMGB1-203ENST00000341423 INSM1Q01101 510 aaPredicted RBP7.81□□□□□ -1.16
HMGB1-203ENST00000341423 SLC34A1Q06495 639 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 CYP1B1Q16678 543 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 NXNL2Q5VZ03 156 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 TTC27Q6P3X3 843 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 ABI3BPQ7Z7G0 1075 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 GPR26Q8NDV2 337 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 OR2V1Q8NHB1 315 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 SPACA9Q96E40 222 aaPredicted RBP7.81□□□□□ -1.16
HMGB1-203ENST00000341423 NMUR2Q9GZQ4 415 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 GNG12Q9UBI6 72 aa7.81□□□□□ -1.16
HMGB1-203ENST00000341423 TIMM22Q9Y584 194 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms