RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 BRF2Q9HAW0 419 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 KLHL9Q9P2J3 617 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 SCML2Q9UQR0 700 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 SLC6A5Q9Y345 797 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 EMC9Q9Y3B6 208 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 TRBV23OR9-2A0A075B6M9 112 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 A0A1W2PPL8 197 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 DGKIO75912 1065 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 AHSA1O95433 338 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 H1F0P07305 194 aaKnown RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 POU2F1P14859 743 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 NCK1P16333 377 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 FMO3P31513 532 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 AGFG1P52594 562 aaKnown RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 MAMLD1Q13495 774 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 RAP1GAP2Q684P5 730 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 APTXQ7Z2E3 356 aaKnown RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 WDR5BQ86VZ2 330 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 FOXRED2Q8IWF2 684 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 HS3ST5Q8IZT8 346 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 ZSWIM2Q8NEG5 633 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 BPIFCQ8NFQ6 507 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 SFXN5Q8TD22 340 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 SLC2A14Q8TDB8 520 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 HOXB13Q92826 284 aaPredicted RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 KLK6Q92876 244 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 RGMAQ96B86 450 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 TLCD1Q96CP7 247 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 UHRF2Q96PU4 802 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 PAPOLGQ9BWT3 736 aaKnown RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 NLE1Q9NVX2 485 aaPredicted RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 CHRNA9Q9UGM1 479 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 NUBP2Q9Y5Y2 271 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 I3L521 148 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 LINC01387J3KSC0 135 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 GAPDHSO14556 408 aaPredicted RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 HRO43593 1189 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 LRATO95237 230 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 EIF4EP06730 217 aaKnown RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 TPOP07202 933 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF20P17024 532 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 CD9P21926 228 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 MAOBP27338 520 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 GRPRP30550 384 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 SNCAP37840 140 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 UQCRFS1P47985 274 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 IDH3GP51553 393 aaPredicted RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 GPLD1P80108 840 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 EMX2Q04743 252 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 PRKCDQ05655 676 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 WSCD2Q2TBF2 565 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 GLYATQ6IB77 296 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 NAXDQ8IW45 347 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 NUP37Q8NFH4 326 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 SHKBP1Q8TBC3 707 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 TRAPPC12Q8WVT3 735 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 SLC5A11Q8WWX8 675 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 SORCS1Q8WY21 1168 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 SLC35C1Q96A29 364 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 HSPBAP1Q96EW2 488 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 SLC47A1Q96FL8 570 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 DDOQ99489 341 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 PRMT8Q9NR22 394 aaPredicted RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 A0A1W2PS29 197 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 BHMG1C9JSJ3 638 aaPredicted RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 PSMD10O75832 226 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 ITGBL1O95965 494 aaPredicted RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 CDKN2CP42773 168 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 GALK1P51570 392 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 CCR8P51685 355 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 SEC61A1P61619 476 aaKnown RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 DLK1P80370 383 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 FAAP100Q0VG06 881 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 SCAPQ12770 1279 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 MALLQ13021 153 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 FGFBP1Q14512 234 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 LEXMQ3ZCV2 418 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 H3F3CQ6NXT2 135 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 GSG1LQ6UXU4 331 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 GPR149Q86SP6 731 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 TMPRSS12Q86WS5 348 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 RNF113BQ8IZP6 322 aaKnown RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 ACBD7Q8N6N7 88 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 SMPDL3AQ92484 453 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 LRCH3Q96II8 777 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 BOD1Q96IK1 185 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 INPP4AQ96PE3 977 aaPredicted RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 FUZQ9BT04 418 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 VRTNQ9H8Y1 702 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 ARNT2Q9HBZ2 717 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 LOC102725191A0A1B0GVB3 256 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 DAPL1A0PJW8 107 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 OR6C6A6NF89 314 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 ZSCAN5BA6NJL1 495 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 SDC3O75056 442 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 DLDP09622 509 aaKnown RBP3.11□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF35P13682 527 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 GOT1P17174 413 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 NT5EP21589 574 aa3.11□□□□□ -1.91
CSMD3-202ENST00000339701 IL3RAP26951 378 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms