RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 CSTAP01040 98 aa13.52□□□□□ -0.25
CBX3-201ENST00000337620 CYP4B1P13584 511 aa13.52□□□□□ -0.25
CBX3-201ENST00000337620 DLSTP36957 453 aa13.52□□□□□ -0.25
CBX3-201ENST00000337620 RAD23AP54725 363 aa13.52□□□□□ -0.25
CBX3-201ENST00000337620 PLAURQ03405 335 aa13.52□□□□□ -0.25
CBX3-201ENST00000337620 DNASE1L3Q13609 305 aa13.52□□□□□ -0.25
CBX3-201ENST00000337620 DGCR6Q14129 220 aa13.52□□□□□ -0.25
CBX3-201ENST00000337620 KDM4DQ6B0I6 523 aa13.52□□□□□ -0.25
CBX3-201ENST00000337620 CACTIN-AS1Q8N1I8 211 aa13.52□□□□□ -0.25
CBX3-201ENST00000337620 OR11G2Q8NGC1 345 aa13.52□□□□□ -0.25
CBX3-201ENST00000337620 OR8K3Q8NH51 312 aa13.52□□□□□ -0.25
CBX3-201ENST00000337620 SLC7A13Q8TCU3 470 aa13.52□□□□□ -0.25
CBX3-201ENST00000337620 KRT84Q9NSB2 600 aa13.52□□□□□ -0.25
CBX3-201ENST00000337620 DNAJB12Q9NXW2 375 aaKnown RBP13.52□□□□□ -0.25
CBX3-201ENST00000337620 NPFFR2Q9Y5X5 522 aa13.52□□□□□ -0.25
CBX3-201ENST00000337620 CNOT1A5YKK6 2376 aaKnown RBP13.52□□□□□ -0.25
CBX3-201ENST00000337620 GVINP1Q7Z2Y8 2422 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 NSG1A0A0A6YYJ2 146 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 TMEM200CA6NKL6 621 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 RAD1O60671 282 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 ANXA8P13928 327 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 STAT5AP42229 794 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 PNLIPRP2P54317 469 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 NHLH1Q02575 133 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 ST3GAL3Q11203 375 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 GK3PQ14409 553 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 SSPNQ14714 243 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 SEC23BQ15437 767 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 NDUFAF6Q330K2 333 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 SLC36A3Q495N2 470 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 FAHD1Q6P587 224 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 NDUFAF7Q7L592 441 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 GRAMD2AQ8IUY3 354 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 OFCC1Q8IZS5 231 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 ELP5Q8TE02 316 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 NR4A3Q92570 626 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 IMMP1LQ96LU5 166 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 RDH12Q96NR8 316 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 MAN2C1Q9NTJ4 1040 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 FAM186AA6NE01 2351 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 DLL1O00548 723 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 OR10H3O60404 316 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 CLIC3O95833 236 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 CELA2AP08217 269 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 POU2F1P14859 743 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 TBXA2RP21731 343 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 F8A1P23610 371 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 HTR2AP28223 471 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 RBMS1P29558 406 aaKnown RBP13.51□□□□□ -0.25
CBX3-201ENST00000337620 RYKP34925 604 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 CAPGP40121 348 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 PDK3Q15120 406 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 EXT1Q16394 746 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 ZSWIM7Q19AV6 140 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 RFX4Q33E94 735 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 PODNL1Q6PEZ8 512 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 APOOLQ6UXV4 268 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 CMIPQ8IY22 773 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 OR5M3Q8NGP4 307 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 RNF217Q8TC41 542 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 PHOSPHO1Q8TCT1 267 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 SLC41A3Q96GZ6 507 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 MBOAT4Q96T53 435 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 ZNF556Q9HAH1 456 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 ZNF160Q9HCG1 818 aa13.51□□□□□ -0.25
CBX3-201ENST00000337620 LOC101059948A0A1B0GTJ6 334 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 C21orf140B9A014 251 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 GTPBP1O00178 669 aaKnown RBP13.5□□□□□ -0.25
CBX3-201ENST00000337620 FAAHO00519 579 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 ZNF354AO60765 605 aaPredicted RBP13.5□□□□□ -0.25
CBX3-201ENST00000337620 UGT2B11O75310 529 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 OR5F1O95221 314 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 GASTP01350 101 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 GNAO1P09471 354 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 LCN1P31025 176 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 POLR2IP36954 125 aaKnown RBP13.5□□□□□ -0.25
CBX3-201ENST00000337620 PSPHP78330 225 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 EPS8Q12929 822 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 KCNAB2Q13303 367 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 TRAM2Q15035 370 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 OR1Q1Q15612 314 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 PLAG1Q6DJT9 500 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 GDF7Q7Z4P5 450 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 PPP1R32Q7Z5V6 425 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 AQP11Q8NBQ7 271 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 ZNF555Q8NEP9 628 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 M1APQ8TC57 530 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 SLC38A4Q969I6 547 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 GTPBP3Q969Y2 492 aaKnown RBP13.5□□□□□ -0.25
CBX3-201ENST00000337620 NIPSNAP1Q9BPW8 284 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 GPR87Q9BY21 358 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 B3GNT4Q9C0J1 378 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 RIBC2Q9H4K1 309 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 EVA1AQ9H8M9 152 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 FAM118AQ9NWS6 357 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 MYOTQ9UBF9 498 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 TESQ9UGI8 421 aaKnown RBP13.5□□□□□ -0.25
CBX3-201ENST00000337620 SLC7A7Q9UM01 511 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 SLC35A3Q9Y2D2 325 aa13.5□□□□□ -0.25
CBX3-201ENST00000337620 PCDHGA6Q9Y5G7 932 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms