RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 SOX30O94993 753 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 KCNK2O95069 426 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 OXSR1O95747 527 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-202ENST00000337571 NUDT14O95848 222 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 CGAP01215 116 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 FGF4P08620 206 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 INHBBP09529 407 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 PABPC4LP0CB38 370 aaKnown RBP9.57□□□□□ -0.88
CAPN3-202ENST00000337571 PPP3CBP16298 524 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 SDC1P18827 310 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 ATP6V1C1P21283 382 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 EIF1P41567 113 aaKnown RBP9.57□□□□□ -0.88
CAPN3-202ENST00000337571 RAC1P63000 192 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 POU6F2P78424 691 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-202ENST00000337571 SLC18A2Q05940 514 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.57□□□□□ -0.88
CAPN3-202ENST00000337571 KANK2Q63ZY3 851 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 ANKRD34AQ69YU3 496 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 RNF165Q6ZSG1 346 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 ESPNLQ6ZVH7 1005 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 ZNF550Q7Z398 422 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 GGNQ86UU5 652 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 LRRC75A-AS1Q8N1F1 130 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 NATD1Q8N6N6 113 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 GATSQ8NAP1 163 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 ZNF527Q8NB42 609 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 OR6K3Q8NGY3 331 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 OR2T11Q8NH01 316 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 B4GALNT2Q8NHY0 566 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 FBXO30Q8TB52 745 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 FAM110BQ8TC76 370 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 CAVIN3Q969G5 261 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 C16orf58Q96GQ5 468 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 SH3YL1Q96HL8 342 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-202ENST00000337571 GMPPAQ96IJ6 420 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-202ENST00000337571 PPP3R2Q96LZ3 170 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 CCL19Q99731 98 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 BTBD2Q9BX70 525 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 HOXD1Q9GZZ0 328 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 TIGARQ9NQ88 270 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 DLL4Q9NR61 685 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 ZCCHC3Q9NUD5 404 aaKnown RBP9.57□□□□□ -0.88
CAPN3-202ENST00000337571 ATAD3AQ9NVI7 634 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 NTMQ9P121 344 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 DNAJC15Q9Y5T4 150 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 PTGDR2Q9Y5Y4 395 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 ABCA4P78363 2273 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 GTPBP1O00178 669 aaKnown RBP9.56□□□□□ -0.88
CAPN3-202ENST00000337571 LSM1O15116 133 aaKnown RBP9.56□□□□□ -0.88
CAPN3-202ENST00000337571 NPHS1O60500 1241 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 PEX11AO75192 247 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 AQP8O94778 261 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 OPN1LWP04000 364 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 KRT16P08779 473 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 ACP2P11117 423 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 BCKDHAP12694 445 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 HOXB4P17483 251 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-202ENST00000337571 MAP3K8P41279 467 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 FRKP42685 505 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-202ENST00000337571 CARD18P57730 90 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 IFFO1Q0D2I5 559 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 TP53BP2Q13625 1128 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 PCLAFQ15004 111 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 MLC1Q15049 377 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 DUSP5Q16690 384 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 TMEM44Q2T9K0 475 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 LSM12Q3MHD2 195 aaKnown RBP9.56□□□□□ -0.88
CAPN3-202ENST00000337571 SPDYE7PQ495Y7 208 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 ATP6AP1LQ52LC2 224 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 ZNF385BQ569K4 471 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 HBMQ6B0K9 141 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 MFSD12Q6NUT3 480 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 CLEC9AQ6UXN8 241 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 C20orf204Q6ZNR8 217 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 BEND4Q6ZU67 534 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 LILRA2Q8N149 483 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 GTPBP8Q8N3Z3 284 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-202ENST00000337571 OR10D3Q8NH80 312 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 OR2V1Q8NHB1 315 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 PHOSPHO1Q8TCT1 267 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 AGR3Q8TD06 166 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 ADAMTS15Q8TE58 950 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 TWIST2Q8WVJ9 160 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 HOXB13Q92826 284 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-202ENST00000337571 FCRL1Q96LA6 429 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 RNF145Q96MT1 663 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 STACQ99469 402 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 TUBB1Q9H4B7 451 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 MED17Q9NVC6 651 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 CLEC4AQ9UMR7 237 aa9.56□□□□□ -0.88
CAPN3-202ENST00000337571 FAF1Q9UNN5 650 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-202ENST00000337571 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 A0A1W2PPR1 153 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 A0A1W2PQD3 144 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 C7orf72A4D263 438 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 GJE1A6NN92 205 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 DEFB108AA8MXU0 73 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 TNFSF11O14788 317 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 PIP5K1BO14986 540 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 ADAMDEC1O15204 470 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms