RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 TESMINQ9Y4I5 508 aa14.01□□□□□ -0.17
PRPF3-201ENST00000324862 DTNAQ9Y4J8 743 aa14.01□□□□□ -0.17
PRPF3-201ENST00000324862 URB1O60287 2271 aaKnown RBP14.01□□□□□ -0.17
PRPF3-201ENST00000324862 THBS1P07996 1170 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 FBXO45P0C2W1 286 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 TBXA2RP21731 343 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 SSR4P51571 173 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 KCNAB2Q13303 367 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 ELOAQ14241 798 aaKnown RBP14□□□□□ -0.17
PRPF3-201ENST00000324862 ZNF791Q3KP31 576 aaPredicted RBP14□□□□□ -0.17
PRPF3-201ENST00000324862 H3F3CQ6NXT2 135 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 DHRS4L2Q6PKH6 230 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 TMEM179BQ7Z7N9 219 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 SPACA3Q8IXA5 215 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 GALNT16Q8N428 558 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 TMEM156Q8N614 296 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 ICA1LQ8NDH6 482 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 OR52J3Q8NH60 311 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 FER1L6-AS2Q96M78 137 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 BARD1Q99728 777 aaKnown RBP14□□□□□ -0.17
PRPF3-201ENST00000324862 EFHD1Q9BUP0 239 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 CCDC86Q9H6F5 360 aaKnown RBP14□□□□□ -0.17
PRPF3-201ENST00000324862 DNAJB12Q9NXW2 375 aaKnown RBP14□□□□□ -0.17
PRPF3-201ENST00000324862 PLA2G3Q9NZ20 509 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 ANKRD11Q6UB99 2663 aaPredicted RBP14□□□□□ -0.17
PRPF3-201ENST00000324862 SCDO00767 359 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 FADS1O60427 444 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 CSTAP01040 98 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 IFNW1P05000 195 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 CCL11P51671 97 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 ZNF136P52737 540 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 AIMP2Q13155 320 aaKnown RBP14□□□□□ -0.17
PRPF3-201ENST00000324862 NRF1Q16656 503 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 FNDC7Q5VTL7 733 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 SNIP1Q8TAD8 396 aaKnown RBP14□□□□□ -0.17
PRPF3-201ENST00000324862 RASSF5Q8WWW0 418 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 ASB15Q8WXK1 588 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 GATA6Q92908 595 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 ZNF300Q96RE9 604 aaPredicted RBP14□□□□□ -0.17
PRPF3-201ENST00000324862 ARHGDIGQ99819 225 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 STMN3Q9NZ72 180 aa14□□□□□ -0.17
PRPF3-201ENST00000324862 DSPP15924 2871 aaKnown RBP13.99□□□□□ -0.17
PRPF3-201ENST00000324862 CPSF4LA6NMK7 179 aaKnown RBP13.99□□□□□ -0.17
PRPF3-201ENST00000324862 C1QTNF9BB2RNN3 333 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 AP3D1O14617 1153 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 WISP1O95388 367 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 C1QTNF9P0C862 333 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 CCL3P10147 92 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 FASP25445 335 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 ITPKBP27987 946 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 PEX2P28328 305 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 RGS8P57771 180 aaPredicted RBP13.99□□□□□ -0.17
PRPF3-201ENST00000324862 LSM11P83369 360 aaKnown RBP eCLIP13.99□□□□□ -0.17
PRPF3-201ENST00000324862 SLC34A1Q06495 639 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 ANKRD34AQ69YU3 496 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 THAP4Q8WY91 577 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 SLC39A7Q92504 469 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 VPS50Q96JG6 964 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 IP6K3Q96PC2 410 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 TBL1XR1Q9BZK7 514 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 LHPPQ9H008 270 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 CACYBPQ9HB71 228 aaKnown RBP13.99□□□□□ -0.17
PRPF3-201ENST00000324862 SLC13A4Q9UKG4 626 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 CHCHD2Q9Y6H1 151 aaPredicted RBP13.99□□□□□ -0.17
PRPF3-201ENST00000324862 MED19A0JLT2 244 aaPredicted RBP13.99□□□□□ -0.17
PRPF3-201ENST00000324862 SAC3D1A6NKF1 404 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 PDLIM1O00151 329 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 CLOCKO15516 846 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 HNRNPRO43390 633 aaKnown RBP13.99□□□□□ -0.17
PRPF3-201ENST00000324862 HS6ST1O60243 411 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 ANGPTL1O95841 491 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 HTR2AP28223 471 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 RRM2P31350 389 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 NTRK2Q16620 822 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 RNF220Q5VTB9 566 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 ZNF227Q86WZ6 799 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 CPNE5Q9HCH3 593 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 GPR83Q9NYM4 423 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 RAXQ9Y2V3 346 aa13.99□□□□□ -0.17
PRPF3-201ENST00000324862 ZNF891A8MT65 544 aaPredicted RBP13.98□□□□□ -0.17
PRPF3-201ENST00000324862 GUSBP08236 651 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 PTGDSP41222 190 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 CCR4P51679 360 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 KCNC4Q03721 635 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 ZNF117Q03924 483 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 TRIP10Q15642 601 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 ATP6AP1Q15904 470 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 SPINK14Q6IE38 97 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 ARMC10Q8N2F6 343 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 DUSP19Q8WTR2 217 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 CIB1Q99828 191 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.98□□□□□ -0.17
PRPF3-201ENST00000324862 A4GNTQ9UNA3 340 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 SLC9A8Q9Y2E8 581 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 ENPP4Q9Y6X5 453 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 ALG1L2C9J202 215 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 SYT5O00445 386 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 NDUFB5O43674 189 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 PRSS23O95084 383 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 THY1P04216 161 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms