RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 LYPD3O95274 346 aa20.76■□□□□ 0.91
PNKP-201ENST00000322344 ZGLP1P0C6A0 271 aa20.76■□□□□ 0.91
PNKP-201ENST00000322344 PRG2P13727 222 aa20.76■□□□□ 0.91
PNKP-201ENST00000322344 BMP7P18075 431 aa20.76■□□□□ 0.91
PNKP-201ENST00000322344 PPP3R1P63098 170 aa20.76■□□□□ 0.91
PNKP-201ENST00000322344 MGAT2Q10469 447 aa20.76■□□□□ 0.91
PNKP-201ENST00000322344 COL9A2Q14055 689 aaPredicted RBP20.76■□□□□ 0.91
PNKP-201ENST00000322344 ZMAT1Q5H9K5 638 aa20.76■□□□□ 0.91
PNKP-201ENST00000322344 ARIH2OSQ8N7S6 290 aa20.76■□□□□ 0.91
PNKP-201ENST00000322344 BBS1Q8NFJ9 593 aa20.76■□□□□ 0.91
PNKP-201ENST00000322344 DPH1Q9BZG8 443 aa20.76■□□□□ 0.91
PNKP-201ENST00000322344 C8orf33Q9H7E9 229 aaPredicted RBP20.76■□□□□ 0.91
PNKP-201ENST00000322344 POLHQ9Y253 713 aa20.76■□□□□ 0.91
PNKP-201ENST00000322344 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.75■□□□□ 0.91
PNKP-201ENST00000322344 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.75■□□□□ 0.91
PNKP-201ENST00000322344 J3QRE1 110 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 SOCS6O14544 535 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 SLC2A10O95528 541 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 LALBAP00709 142 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 IFI30P13284 250 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 PVRP15151 417 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 PAICSP22234 425 aaKnown RBP20.75■□□□□ 0.91
PNKP-201ENST00000322344 OR2B6P58173 313 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 ZNF544Q6NX49 715 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 ZNF322Q6U7Q0 402 aaPredicted RBP20.75■□□□□ 0.91
PNKP-201ENST00000322344 TMEM92Q6UXU6 159 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 PRSS41Q7RTY9 318 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 NRARPQ7Z6K4 114 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 TMEFF1Q8IYR6 380 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 TMEM52Q8NDY8 209 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 SPRYD4Q8WW59 207 aaPredicted RBP20.75■□□□□ 0.91
PNKP-201ENST00000322344 ABHD8Q96I13 439 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 SYNDIG1Q9H7V2 258 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 TRPV5Q9NQA5 729 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 KCNE5Q9UJ90 142 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 TRANK1O15050 2925 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 CASKO14936 926 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 BRINP1O60477 761 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 GKN3PP0CG01 181 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 AZGP1P25311 298 aaKnown RBP20.75■□□□□ 0.91
PNKP-201ENST00000322344 RAB38P57729 211 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 ASAH1Q13510 395 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 GPR50Q13585 617 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 CARTPTQ16568 116 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 PDZK1Q5T2W1 519 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 TMPRSS11FQ6ZWK6 438 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 SPATC1Q76KD6 591 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 MEPCEQ7L2J0 689 aaKnown RBP20.75■□□□□ 0.91
PNKP-201ENST00000322344 ABI3BPQ7Z7G0 1075 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 LNX2Q8N448 690 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 ZFP41Q8N8Y5 198 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 SYT14Q8NB59 555 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 CTHRC1Q96CG8 243 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 ZNF559Q9BR84 538 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 IL20RAQ9UHF4 553 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 SCN3AQ9NY46 2000 aa20.75■□□□□ 0.91
PNKP-201ENST00000322344 A0A1W2PQ09 198 aa20.74■□□□□ 0.91
PNKP-201ENST00000322344 PEX12O00623 359 aa20.74■□□□□ 0.91
PNKP-201ENST00000322344 BHLHE40O14503 412 aa20.74■□□□□ 0.91
PNKP-201ENST00000322344 SEC14L5O43304 696 aa20.74■□□□□ 0.91
PNKP-201ENST00000322344 COQ9O75208 318 aa20.74■□□□□ 0.91
PNKP-201ENST00000322344 SEMA4FO95754 770 aa20.74■□□□□ 0.91
PNKP-201ENST00000322344 CFL1P23528 166 aaKnown RBP20.74■□□□□ 0.91
PNKP-201ENST00000322344 ZNF791Q3KP31 576 aaPredicted RBP20.74■□□□□ 0.91
PNKP-201ENST00000322344 GARNL3Q5VVW2 1013 aa20.74■□□□□ 0.91
PNKP-201ENST00000322344 NIPAL3Q6P499 406 aa20.74■□□□□ 0.91
PNKP-201ENST00000322344 ZNF613Q6PF04 617 aa20.74■□□□□ 0.91
PNKP-201ENST00000322344 WDR88Q6ZMY6 472 aa20.74■□□□□ 0.91
PNKP-201ENST00000322344 OR5T3Q8NGG3 340 aa20.74■□□□□ 0.91
PNKP-201ENST00000322344 RPLP0P6Q8NHW5 317 aa20.74■□□□□ 0.91
PNKP-201ENST00000322344 PATE1Q8WXA2 126 aa20.74■□□□□ 0.91
PNKP-201ENST00000322344 TIGARQ9NQ88 270 aa20.74■□□□□ 0.91
PNKP-201ENST00000322344 MED31Q9Y3C7 131 aa20.74■□□□□ 0.91
PNKP-201ENST00000322344 TCRBV21S2A2A0A5A6 115 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 FAM86C2PA6NEL3 165 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 PRAMEF26H0Y7S4 382 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 POLR1CO15160 346 aaPredicted RBP20.73■□□□□ 0.91
PNKP-201ENST00000322344 SSX4O60224 188 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 TMCC2O75069 709 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 NKX2-2O95096 273 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 GUSBP08236 651 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 CELP19835 753 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 MAKP20794 623 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 GABRA3P34903 492 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 KCNJ8Q15842 424 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 AMZ1Q400G9 498 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 PLBD1Q6P4A8 553 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 MARCH9Q86YJ5 346 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 RAB43Q86YS6 212 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 UBQLNLQ8IYU4 475 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 ACBD7Q8N6N7 88 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 DNAJA4Q8WW22 397 aaPredicted RBP20.73■□□□□ 0.91
PNKP-201ENST00000322344 HOXB13Q92826 284 aaPredicted RBP20.73■□□□□ 0.91
PNKP-201ENST00000322344 CCDC3Q9BQI4 270 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 SLC22A4Q9H015 551 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 TMEM27Q9HBJ8 222 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 FBXO34Q9NWN3 711 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 CLDND1Q9NY35 253 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 GABRPO00591 440 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 SLC35E2P0CK97 266 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms