RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 LEFTY1O75610 366 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 RPS5P46782 204 aaKnown RBP15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 UBE2KP61086 200 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 MGAT3Q09327 533 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 DEFB115Q30KQ5 88 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 NDUFAF5Q5TEU4 345 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 MEX3BQ6ZN04 569 aaKnown RBP15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 PCDHA9Q9Y5H5 950 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 ADARB1P78563 741 aaKnown RBP15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 IRF4Q15306 451 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 OR4D1Q15615 310 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 ZNF691Q5VV52 312 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 SIX4Q9UIU6 781 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 PCDHGA5Q9Y5G8 931 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 TLE1Q04724 770 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 TMEM135Q86UB9 458 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 SLC30A7Q8NEW0 376 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 OR52A5Q9H2C5 316 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 COPS3Q9UNS2 423 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 SH3BP2P78314 561 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 TANGO2Q6ICL3 276 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 CREB3L2Q70SY1 520 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 NPLOC4Q8TAT6 608 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 ZNF75AQ96N20 296 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 DEFB126Q9BYW3 111 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 DCAF13Q9NV06 445 aaKnown RBP15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 CNOT2Q9NZN8 540 aaKnown RBP15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 HTR3BO95264 441 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 S1PR4O95977 384 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 RPS26P11Q5JNZ5 115 aaPredicted RBP15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 OR9Q2Q8NGE9 314 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 NETO1Q8TDF5 533 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 MUL1Q969V5 352 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 A0A1B0GUL6 1792 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 KDM3BQ7LBC6 1761 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 LOC102723532A0A0G2JNH3 316 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 MTMR11A4FU01 709 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 RNASET2O00584 256 aaKnown RBP15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 UBE2NP61088 152 aaKnown RBP15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 TMEM41BQ5BJD5 291 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 CYS1Q717R9 158 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 GAREM2Q75VX8 874 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 STEAP2Q8NFT2 490 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 MICU1Q9BPX6 476 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 CACNA1SQ13698 1873 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 A0A1W2PPV4 95 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 CXCR4P61073 352 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 MIB2Q96AX9 1013 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 ARHGAP39Q9C0H5 1083 aa15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 RANGRFQ9HD47 186 aaPredicted RBP15.95■□□□□ 0.14
SMCHD1-201ENST00000320876 BHLHE40O14503 412 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 CDK4P11802 303 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 KITLGP21583 273 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 TLE4Q04727 773 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 METAP1DQ6UB28 335 aaPredicted RBP15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 MYEF2Q9P2K5 600 aaKnown RBP15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 WRAP73Q9P2S5 460 aaPredicted RBP15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 SLC6A14Q9UN76 642 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 C4AP0C0L4 1744 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 C4BP0C0L5 1744 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 NDUFB2O95178 105 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 FCRL1Q96LA6 429 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 SAMD8Q96LT4 415 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 SPTBP11277 2137 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 RAB28P51157 221 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 PTPRCAPQ14761 206 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 CNN3Q15417 329 aaKnown RBP15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 LACC1Q8IV20 430 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 OR52B6Q8NGF0 335 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 SLC7A7Q9UM01 511 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 DNAJC15Q9Y5T4 150 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 NFKBIEO00221 500 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 EIF3FO00303 357 aaPredicted RBP15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 DUX1O43812 170 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 IL1AP01583 271 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 ACTBL2Q562R1 376 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 OR4K15Q8NH41 348 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 MITD1Q8WV92 249 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 MYO5AQ9Y4I1 1855 aaKnown RBP15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 NME4O00746 187 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 FADS1O60427 444 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 RAB40ALP0C0E4 278 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 CTXN1P60606 82 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 RAB40AQ8WXH6 277 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 LAMB1P07942 1786 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 NFYAP23511 347 aaPredicted RBP15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 VASH1Q7L8A9 365 aaPredicted RBP15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 OR4Q3Q8NH05 313 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 NMNAT1Q9HAN9 279 aaPredicted RBP15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 ATXN7L1Q9ULK2 861 aaPredicted RBP15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 RFXAPO00287 272 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 PROS1P07225 676 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 RING1Q06587 406 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 MFGE8Q08431 387 aaPredicted RBP15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 ZBTB8AQ96BR9 441 aa15.94■□□□□ 0.14
SMCHD1-201ENST00000320876 KIF13BQ9NQT8 1826 aa15.93■□□□□ 0.14
SMCHD1-201ENST00000320876 HLA-HP01893 362 aa15.93■□□□□ 0.14
SMCHD1-201ENST00000320876 RNF4P78317 190 aa15.93■□□□□ 0.14
SMCHD1-201ENST00000320876 NNATQ16517 81 aa15.93■□□□□ 0.14
SMCHD1-201ENST00000320876 APOOLQ6UXV4 268 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms