RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 SIM2Q14190 667 aaPredicted RBP12.18□□□□□ -0.46
CPNE1-201ENST00000317677 ZNF630Q2M218 657 aaPredicted RBP12.18□□□□□ -0.46
CPNE1-201ENST00000317677 CYP27C1Q4G0S4 372 aa12.18□□□□□ -0.46
CPNE1-201ENST00000317677 DEFB134Q4QY38 66 aa12.18□□□□□ -0.46
CPNE1-201ENST00000317677 CRB2Q5IJ48 1285 aa12.18□□□□□ -0.46
CPNE1-201ENST00000317677 OR2T5Q6IEZ7 315 aa12.18□□□□□ -0.46
CPNE1-201ENST00000317677 TFAP2EQ6VUC0 442 aa12.18□□□□□ -0.46
CPNE1-201ENST00000317677 C16orf62Q7Z3J2 963 aa12.18□□□□□ -0.46
CPNE1-201ENST00000317677 C17orf82Q86X59 251 aaPredicted RBP12.18□□□□□ -0.46
CPNE1-201ENST00000317677 CCDC116Q8IYX3 515 aa12.18□□□□□ -0.46
CPNE1-201ENST00000317677 OR2T29Q8NH02 315 aa12.18□□□□□ -0.46
CPNE1-201ENST00000317677 ZNF675Q8TD23 568 aa12.18□□□□□ -0.46
CPNE1-201ENST00000317677 SLC38A5Q8WUX1 472 aa12.18□□□□□ -0.46
CPNE1-201ENST00000317677 COL21A1Q96P44 957 aa12.18□□□□□ -0.46
CPNE1-201ENST00000317677 DOHHQ9BU89 302 aa12.18□□□□□ -0.46
CPNE1-201ENST00000317677 PRRG3Q9BZD7 231 aa12.18□□□□□ -0.46
CPNE1-201ENST00000317677 SHARPINQ9H0F6 387 aa12.18□□□□□ -0.46
CPNE1-201ENST00000317677 ANKRA2Q9H9E1 313 aa12.18□□□□□ -0.46
CPNE1-201ENST00000317677 LYARQ9NX58 379 aaKnown RBP12.18□□□□□ -0.46
CPNE1-201ENST00000317677 COQ3Q9NZJ6 369 aa12.18□□□□□ -0.46
CPNE1-201ENST00000317677 RPS10-NUDT3A0A1W2PQS6 291 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 ZNF860A6NHJ4 632 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 A8MUA0 341 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 YKT6O15498 198 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 RGS5O15539 181 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 SUV39H1O43463 412 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 RAF1P04049 648 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 DAPP51397 102 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 ITGA1P56199 1179 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 GPR85P60893 370 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 RRAS2P62070 204 aaPredicted RBP12.17□□□□□ -0.46
CPNE1-201ENST00000317677 CSTF1Q05048 431 aaKnown RBP12.17□□□□□ -0.46
CPNE1-201ENST00000317677 SCRN3Q0VDG4 424 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 TP53BP2Q13625 1128 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 TATDN3Q17R31 274 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 DEFB110Q30KQ9 67 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 PLET1Q6UQ28 207 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 MAMSTRQ6ZN01 415 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 OLIG3Q7RTU3 272 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 OOSP2Q86WS3 158 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 OR8H3Q8N146 312 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 ARHGEF39Q8N4T4 335 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 TTC29Q8NA56 475 aaPredicted RBP12.17□□□□□ -0.46
CPNE1-201ENST00000317677 ZBTB44Q8NCP5 570 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 OR5D16Q8NGK9 328 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 OTUB1Q96FW1 271 aaPredicted RBP12.17□□□□□ -0.46
CPNE1-201ENST00000317677 AHCYL2Q96HN2 611 aaKnown RBP12.17□□□□□ -0.46
CPNE1-201ENST00000317677 SORCS2Q96PQ0 1159 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 BBS4Q96RK4 519 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 RIBC2Q9H4K1 309 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 A4GALTQ9NPC4 353 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 LAMA1P25391 3075 aa12.17□□□□□ -0.46
CPNE1-201ENST00000317677 EFCAB10A6NFE3 127 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 MYL12BO14950 172 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 SDC3O75056 442 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 NME6O75414 186 aaPredicted RBP12.16□□□□□ -0.46
CPNE1-201ENST00000317677 NR2F6P10588 404 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 MYL12AP19105 171 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 RAB3AP20336 220 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 NTSP30990 170 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 SOX18P35713 384 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 FASLGP48023 281 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 CSNK1EP49674 416 aaKnown RBP12.16□□□□□ -0.46
CPNE1-201ENST00000317677 LIM2P55344 173 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 TNFRSF17Q02223 184 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 FUT5Q11128 374 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 ELOCQ15369 112 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 LTB4RQ15722 352 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 SPDYE7PQ495Y7 208 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 KLHL12Q53G59 568 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 GDPGP1Q6ZNW5 385 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 APOBEC4Q8WW27 367 aaKnown RBP12.16□□□□□ -0.46
CPNE1-201ENST00000317677 APH1BQ8WW43 257 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 ST8SIA4Q92187 359 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 TRMT61AQ96FX7 289 aaKnown RBP12.16□□□□□ -0.46
CPNE1-201ENST00000317677 TMEM19Q96HH6 336 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 SERINC2Q96SA4 455 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 KCNS3Q9BQ31 491 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 RNF167Q9H6Y7 350 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 HEXA-AS1Q9H8Q6 139 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 STARD5Q9NSY2 213 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 NDUFAF4Q9P032 175 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 DAPP1Q9UN19 280 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 ALG5Q9Y673 324 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 CIB4A0PJX0 185 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 CLCA1A8K7I4 914 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 KHNYNO15037 678 aaKnown RBP12.16□□□□□ -0.46
CPNE1-201ENST00000317677 PLA2G10O15496 165 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 HRO43593 1189 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 SLC43A1O75387 559 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 BCHEP06276 602 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 ZP3P21754 424 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 OR1E2P47887 323 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 CXCL12P48061 93 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 HOXA1P49639 335 aaPredicted RBP12.16□□□□□ -0.46
CPNE1-201ENST00000317677 ARHGDIAP52565 204 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 BLVRAP53004 296 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 PSPHP78330 225 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 TGM3Q08188 693 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 MRPL28Q13084 256 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms