RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 OR2T4Q8NH00 348 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 OR52N1Q8NH53 320 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 CHTF18Q8WVB6 975 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 RBPMSQ93062 196 aaKnown RBP18.15■□□□□ 0.5
USP48-201ENST00000308271 NEURL3Q96EH8 262 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 NECAB3Q96P71 396 aaPredicted RBP18.15■□□□□ 0.5
USP48-201ENST00000308271 GSX2Q9BZM3 304 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 CWH43Q9H720 699 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 V9GY05 133 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 RAB40ALP0C0E4 278 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 RBMXP38159 391 aaKnown RBP18.15■□□□□ 0.5
USP48-201ENST00000308271 ERVK-25P63136 954 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 GAB1Q13480 694 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 RHEBQ15382 184 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 TMEM185AQ8NFB2 350 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 RAB40AQ8WXH6 277 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 A4GALTQ9NPC4 353 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 TMEM30AQ9NV96 361 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 PHYHO14832 338 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 CLEC3AO75596 197 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 SPARCP09486 303 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 NPR2P20594 1047 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 CBLP22681 906 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 NUDT1P36639 197 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 CD300CQ08708 224 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 MBTPS1Q14703 1052 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 HENMT1Q5T8I9 393 aaKnown RBP18.15■□□□□ 0.5
USP48-201ENST00000308271 TBC1D20Q96BZ9 403 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 TRAPPC4Q9Y296 219 aa18.15■□□□□ 0.5
USP48-201ENST00000308271 A8MVJ9 347 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 DNAJB6O75190 326 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 AHSA1O95433 338 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 ENDOUP21128 410 aaKnown RBP18.14■□□□□ 0.49
USP48-201ENST00000308271 PDHA2P29803 388 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 ETV6P41212 452 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 RPS15AP62244 130 aaKnown RBP18.14■□□□□ 0.49
USP48-201ENST00000308271 BCDIN3DQ7Z5W3 292 aaKnown RBP18.14■□□□□ 0.49
USP48-201ENST00000308271 KCTD20Q7Z5Y7 419 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 SERPINA12Q8IW75 414 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 FAM26EQ8N5C1 309 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 AHDC1Q5TGY3 1603 aaPredicted RBP18.14■□□□□ 0.49
USP48-201ENST00000308271 NFYAP23511 347 aaPredicted RBP18.14■□□□□ 0.49
USP48-201ENST00000308271 ADH6P28332 368 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 PRMT2P55345 433 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 TCTE1Q5JU00 501 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 ENTPD8Q5MY95 495 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 NXNL2Q5VZ03 156 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 GSG1LQ6UXU4 331 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 IQCF2Q8IXL9 164 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 ZNF417Q8TAU3 575 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 SYNPRQ8TBG9 265 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 SLC6A7Q99884 636 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 SRRQ9GZT4 340 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 ZNF226Q9NYT6 803 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 KCNK2O95069 426 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 ADRB3P13945 408 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 HSD11B1P28845 292 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 MC2RQ01718 297 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 APOOLQ6UXV4 268 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 OPALINQ96PE5 141 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 ZNF700Q9H0M5 742 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 CXorf36Q9H7Y0 433 aa18.14■□□□□ 0.49
USP48-201ENST00000308271 EEF1E1-BLOC1S5C9J1V9 151 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 RAB3DO95716 219 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 AKAIN1P0CW23 69 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 GDNFP39905 211 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 CNKSR3Q6P9H4 555 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 CALHM3Q86XJ0 350 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 TMEM25Q86YD3 366 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 CPXM2Q8N436 756 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 OR5M3Q8NGP4 307 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 CD99L2Q8TCZ2 262 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 MAFIPQ8WZ33 124 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 BPIFA2Q96DR5 249 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 NECTIN4Q96NY8 510 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 GPRIN2O60269 458 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 SCGB1D2O95969 90 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 LALBAP00709 142 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 PPP3CBP16298 524 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 SHC1P29353 583 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 RAB33AQ14088 237 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 CD300LFQ8TDQ1 290 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 CREB3L4Q8TEY5 395 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 PCNPQ8WW12 178 aaKnown RBP18.13■□□□□ 0.49
USP48-201ENST00000308271 CMKLR1Q99788 373 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 ORAI3Q9BRQ5 295 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 BTBD2Q9BX70 525 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 R3HDMLQ9H3Y0 253 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 RGCCQ9H4X1 137 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 ASF1BQ9NVP2 202 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 BORCS7-ASMTA0A0B4J1R7 106 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 B4GALT2O60909 372 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 CSF3P09919 207 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 GP1BBP13224 206 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 PFN3P60673 137 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 CYCSP99999 105 aaKnown RBP18.13■□□□□ 0.49
USP48-201ENST00000308271 HOXC5Q00444 222 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 SYT14P1Q58G82 188 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 ADGRF3Q8IZF5 1079 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 TMEM43Q9BTV4 400 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms