RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 VCX3AQ9NNX9 186 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 CCNB1IP1Q9NPC3 277 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 PNO1Q9NRX1 252 aaKnown RBP10.98□□□□□ -0.65
TRIM40-205ENST00000307859 RASSF1Q9NS23 344 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 PLCXD1Q9NUJ7 323 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 PCDHGB1Q9Y5G3 927 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 GCN1Q92616 2671 aaKnown RBP10.98□□□□□ -0.65
TRIM40-205ENST00000307859 ASPMQ8IZT6 3477 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 ZZEF1O43149 2961 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 MPDZO75970 2070 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 DYRK3O43781 588 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 MPZL2O60487 215 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 FAM20BO75063 409 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 DDAH2O95865 285 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 ONECUT2O95948 504 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 PRG2P13727 222 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 SPINK2P20155 84 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 GSTM3P21266 225 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 HTR2AP28223 471 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 IFNGR2P38484 337 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 IDH2P48735 452 aaKnown RBP10.98□□□□□ -0.65
TRIM40-205ENST00000307859 PSMD4P55036 377 aaKnown RBP10.98□□□□□ -0.65
TRIM40-205ENST00000307859 CDC42P60953 191 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 LSM11P83369 360 aaKnown RBP eCLIP10.98□□□□□ -0.65
TRIM40-205ENST00000307859 DAB2P98082 770 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 RAB39AQ14964 217 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 SMN1Q16637 294 aaKnown RBP10.98□□□□□ -0.65
TRIM40-205ENST00000307859 ZSWIM7Q19AV6 140 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 VWA2Q5GFL6 755 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 PDZK1Q5T2W1 519 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 MFSD4BQ5TF39 518 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 C12orf73Q69YU5 71 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 CCDC103Q8IW40 242 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 BCORP1Q8N888 145 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 PLPP5Q8NEB5 264 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 GNPDA2Q8TDQ7 276 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 ZNF721Q8TF20 911 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 IPCEF1Q8WWN9 437 aaPredicted RBP10.98□□□□□ -0.65
TRIM40-205ENST00000307859 OIT3Q8WWZ8 545 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 SLC35B4Q969S0 331 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 SLC46A1Q96NT5 459 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 SIGLEC11Q96RL6 698 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 GPA33Q99795 319 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 VN1R1Q9GZP7 353 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 SLC22A11Q9NSA0 550 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 C14orf105Q9NVL8 296 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 IMPAD1Q9NX62 359 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 RARRES3Q9UL19 164 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 CBLCQ9ULV8 474 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 MSRB2Q9Y3D2 182 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 MAST4O15021 2626 aa10.98□□□□□ -0.65
TRIM40-205ENST00000307859 KIF26BQ2KJY2 2108 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 TRAPPC13A5PLN9 417 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 PTGES3LE9PB15 166 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 H3BSA7 217 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 NTN3O00634 580 aaPredicted RBP10.97□□□□□ -0.65
TRIM40-205ENST00000307859 BCAS1O75363 584 aaPredicted RBP10.97□□□□□ -0.65
TRIM40-205ENST00000307859 LYPD3O95274 346 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 TIAF1O95411 115 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 SOX14O95416 240 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 ZNF883P0CG24 379 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 PCMT1P22061 227 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 PPICP45877 212 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 OMPP47874 163 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 ATP12AP54707 1039 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 PIGFQ07326 219 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 FGFBP1Q14512 234 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 NEDD8Q15843 81 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 TMEM236Q5W0B7 351 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 ZNF730Q6ZMV8 503 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 P3H2Q8IVL5 708 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 NKAIN4Q8IVV8 208 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 CMIPQ8IY22 773 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 ZNF321PQ8N8H1 164 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 OR14A16Q8NHC5 309 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 SLC2A12Q8TD20 617 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 ART5Q96L15 291 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 PRSS27Q9BQR3 290 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 GTPBP2Q9BX10 602 aaKnown RBP10.97□□□□□ -0.65
TRIM40-205ENST00000307859 SYNDIG1Q9H7V2 258 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.97□□□□□ -0.65
TRIM40-205ENST00000307859 FKBP14Q9NWM8 211 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 CTSFQ9UBX1 484 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 CFL2Q9Y281 166 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 OR10H1Q9Y4A9 318 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 SNX5Q9Y5X3 404 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 CLCA3PQ9Y6N3 262 aa10.97□□□□□ -0.65
TRIM40-205ENST00000307859 VGLL3A8MV65 326 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 D6RAR5 112 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 ZNF701M0R085 212 aaPredicted RBP10.96□□□□□ -0.65
TRIM40-205ENST00000307859 KLF4O43474 513 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 SEC14L2O76054 403 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 IGFBP1P08833 259 aaPredicted RBP10.96□□□□□ -0.65
TRIM40-205ENST00000307859 GKN3PP0CG01 181 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 ITIH1P19827 911 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 MPLP40238 635 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 RFX3P48380 749 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 TSPAN31Q12999 210 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 OR1Q1Q15612 314 aa10.96□□□□□ -0.65
TRIM40-205ENST00000307859 NSDHLQ15738 373 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms